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Simplifying functional network representation and interpretation through causality clustering
Functional networks, i.e. networks representing the interactions between the elements of a complex system and reconstructed from the observed elements’ dynamics, are becoming a fundamental tool to unravel the structures created by the movement of information in systems like the human brain. They als...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319423/ https://www.ncbi.nlm.nih.gov/pubmed/34321541 http://dx.doi.org/10.1038/s41598-021-94797-y |
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author | Zanin, Massimiliano |
author_facet | Zanin, Massimiliano |
author_sort | Zanin, Massimiliano |
collection | PubMed |
description | Functional networks, i.e. networks representing the interactions between the elements of a complex system and reconstructed from the observed elements’ dynamics, are becoming a fundamental tool to unravel the structures created by the movement of information in systems like the human brain. They also present drawbacks, one of the most important being the inherent difficulty in representing and interpreting the resulting structures for large number of nodes and links. I here propose a causality clustering approach, based on grouping nodes into clusters according to their similarity in the overall information dynamics, the latter one being measured by a causality metric. The whole system can then arbitrarily be simplified, with nodes being grouped in e.g. sources, brokers and sinks of information. The advantages and limitations of the proposed approach are discussed using a set of synthetic and real-world data sets, the latter ones representing two neuroscience and technological problems. |
format | Online Article Text |
id | pubmed-8319423 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83194232021-07-30 Simplifying functional network representation and interpretation through causality clustering Zanin, Massimiliano Sci Rep Article Functional networks, i.e. networks representing the interactions between the elements of a complex system and reconstructed from the observed elements’ dynamics, are becoming a fundamental tool to unravel the structures created by the movement of information in systems like the human brain. They also present drawbacks, one of the most important being the inherent difficulty in representing and interpreting the resulting structures for large number of nodes and links. I here propose a causality clustering approach, based on grouping nodes into clusters according to their similarity in the overall information dynamics, the latter one being measured by a causality metric. The whole system can then arbitrarily be simplified, with nodes being grouped in e.g. sources, brokers and sinks of information. The advantages and limitations of the proposed approach are discussed using a set of synthetic and real-world data sets, the latter ones representing two neuroscience and technological problems. Nature Publishing Group UK 2021-07-28 /pmc/articles/PMC8319423/ /pubmed/34321541 http://dx.doi.org/10.1038/s41598-021-94797-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zanin, Massimiliano Simplifying functional network representation and interpretation through causality clustering |
title | Simplifying functional network representation and interpretation through causality clustering |
title_full | Simplifying functional network representation and interpretation through causality clustering |
title_fullStr | Simplifying functional network representation and interpretation through causality clustering |
title_full_unstemmed | Simplifying functional network representation and interpretation through causality clustering |
title_short | Simplifying functional network representation and interpretation through causality clustering |
title_sort | simplifying functional network representation and interpretation through causality clustering |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319423/ https://www.ncbi.nlm.nih.gov/pubmed/34321541 http://dx.doi.org/10.1038/s41598-021-94797-y |
work_keys_str_mv | AT zaninmassimiliano simplifyingfunctionalnetworkrepresentationandinterpretationthroughcausalityclustering |