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Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning
Although neoadjuvant chemotherapy (NAC) is a crucial component of treatment for locally advanced breast cancer (LABC), only about 70% of patients respond to it. Effective adjustment of NAC for individual patients can significantly improve survival rates of those resistant to standard regimens. Thus,...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Neoplasia Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319580/ https://www.ncbi.nlm.nih.gov/pubmed/34293685 http://dx.doi.org/10.1016/j.tranon.2021.101183 |
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author | Moghadas-Dastjerdi, Hadi Rahman, Shan-E-Tallat Hira Sannachi, Lakshmanan Wright, Frances C. Gandhi, Sonal Trudeau, Maureen E. Sadeghi-Naini, Ali Czarnota, Gregory J. |
author_facet | Moghadas-Dastjerdi, Hadi Rahman, Shan-E-Tallat Hira Sannachi, Lakshmanan Wright, Frances C. Gandhi, Sonal Trudeau, Maureen E. Sadeghi-Naini, Ali Czarnota, Gregory J. |
author_sort | Moghadas-Dastjerdi, Hadi |
collection | PubMed |
description | Although neoadjuvant chemotherapy (NAC) is a crucial component of treatment for locally advanced breast cancer (LABC), only about 70% of patients respond to it. Effective adjustment of NAC for individual patients can significantly improve survival rates of those resistant to standard regimens. Thus, the early prediction of NAC outcome is of great importance in facilitating a personalized paradigm for breast cancer therapeutics. In this study, quantitative computed tomography (qCT) parametric imaging in conjunction with machine learning techniques were investigated to predict LABC tumor response to NAC. Textural and second derivative textural (SDT) features of CT images of 72 patients diagnosed with LABC were analysed before the initiation of NAC to quantify intra-tumor heterogeneity. These quantitative features were processed through a correlation-based feature reduction followed by a sequential feature selection with a bootstrap 0.632+ area under the receiver operating characteristic (ROC) curve [Formula: see text] criterion. The best feature subset consisted of a combination of one textural and three SDT features. Using these features, an AdaBoost decision tree could predict the patient response with a cross-validated [Formula: see text] accuracy, sensitivity and specificity of 0.88, 85%, 88% and 75%, respectively. This study demonstrates, for the first time, that a combination of textural and SDT features of CT images can be used to predict breast cancer response NAC prior to the start of treatment which can potentially facilitate early therapy adjustments. |
format | Online Article Text |
id | pubmed-8319580 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Neoplasia Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-83195802021-08-06 Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning Moghadas-Dastjerdi, Hadi Rahman, Shan-E-Tallat Hira Sannachi, Lakshmanan Wright, Frances C. Gandhi, Sonal Trudeau, Maureen E. Sadeghi-Naini, Ali Czarnota, Gregory J. Transl Oncol Original Research Although neoadjuvant chemotherapy (NAC) is a crucial component of treatment for locally advanced breast cancer (LABC), only about 70% of patients respond to it. Effective adjustment of NAC for individual patients can significantly improve survival rates of those resistant to standard regimens. Thus, the early prediction of NAC outcome is of great importance in facilitating a personalized paradigm for breast cancer therapeutics. In this study, quantitative computed tomography (qCT) parametric imaging in conjunction with machine learning techniques were investigated to predict LABC tumor response to NAC. Textural and second derivative textural (SDT) features of CT images of 72 patients diagnosed with LABC were analysed before the initiation of NAC to quantify intra-tumor heterogeneity. These quantitative features were processed through a correlation-based feature reduction followed by a sequential feature selection with a bootstrap 0.632+ area under the receiver operating characteristic (ROC) curve [Formula: see text] criterion. The best feature subset consisted of a combination of one textural and three SDT features. Using these features, an AdaBoost decision tree could predict the patient response with a cross-validated [Formula: see text] accuracy, sensitivity and specificity of 0.88, 85%, 88% and 75%, respectively. This study demonstrates, for the first time, that a combination of textural and SDT features of CT images can be used to predict breast cancer response NAC prior to the start of treatment which can potentially facilitate early therapy adjustments. Neoplasia Press 2021-07-19 /pmc/articles/PMC8319580/ /pubmed/34293685 http://dx.doi.org/10.1016/j.tranon.2021.101183 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Original Research Moghadas-Dastjerdi, Hadi Rahman, Shan-E-Tallat Hira Sannachi, Lakshmanan Wright, Frances C. Gandhi, Sonal Trudeau, Maureen E. Sadeghi-Naini, Ali Czarnota, Gregory J. Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title | Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title_full | Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title_fullStr | Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title_full_unstemmed | Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title_short | Prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of CT images and machine learning |
title_sort | prediction of chemotherapy response in breast cancer patients at pre-treatment using second derivative texture of ct images and machine learning |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319580/ https://www.ncbi.nlm.nih.gov/pubmed/34293685 http://dx.doi.org/10.1016/j.tranon.2021.101183 |
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