Cargando…
Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor
The geometry, frontier molecular orbitals (FMOs), vibrational, NBO analysis, and molecular docking simulations of aflatoxins (B1, B2, M1, M2, G1, G2), zearalenone (ZEA) emodin (EMO), alternariol (AOH), alternariol monoethyl ether (AMME), and tenuazonic acid (TeA) mycotoxins have been extensively the...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319581/ https://www.ncbi.nlm.nih.gov/pubmed/34345733 http://dx.doi.org/10.1016/j.heliyon.2021.e07544 |
_version_ | 1783730479747301376 |
---|---|
author | Agwupuye, John A. Neji, Peter A. Louis, Hitler Odey, Joseph O. Unimuke, Tomsmith O. Bisiong, Emmanuel A. Eno, Ededet A. Utsu, Patrick M. Ntui, Tabe N. |
author_facet | Agwupuye, John A. Neji, Peter A. Louis, Hitler Odey, Joseph O. Unimuke, Tomsmith O. Bisiong, Emmanuel A. Eno, Ededet A. Utsu, Patrick M. Ntui, Tabe N. |
author_sort | Agwupuye, John A. |
collection | PubMed |
description | The geometry, frontier molecular orbitals (FMOs), vibrational, NBO analysis, and molecular docking simulations of aflatoxins (B1, B2, M1, M2, G1, G2), zearalenone (ZEA) emodin (EMO), alternariol (AOH), alternariol monoethyl ether (AMME), and tenuazonic acid (TeA) mycotoxins have been extensively theoretically studied and discussed based on quantum density functional theory calculations using Gaussian 16 software package. The theoretical computation for the geometry optimization, NBOs, and the molecular docking interaction was conducted using Density Functional Theory with B3LYP/6-31+G(d,p), NBO program, and AutoDock Vina tools respectively. Charge delocalization patterns and second-order perturbation energies of the most interacting natural bond orbitals (NBOs) of these mycotoxins have also been computed and predicted. Interestingly, among the mycotoxins investigated, aflatoxin G1 is seen to give the strongest stabilization energy while Zearalenone shows the highest tendency to accept electron(s) and emodin, an emerging mycotoxin gave the best binding pose within the androgen receptor pocket with a mean binding affinity of -7.40 kcal/mol. |
format | Online Article Text |
id | pubmed-8319581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-83195812021-08-02 Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor Agwupuye, John A. Neji, Peter A. Louis, Hitler Odey, Joseph O. Unimuke, Tomsmith O. Bisiong, Emmanuel A. Eno, Ededet A. Utsu, Patrick M. Ntui, Tabe N. Heliyon Research Article The geometry, frontier molecular orbitals (FMOs), vibrational, NBO analysis, and molecular docking simulations of aflatoxins (B1, B2, M1, M2, G1, G2), zearalenone (ZEA) emodin (EMO), alternariol (AOH), alternariol monoethyl ether (AMME), and tenuazonic acid (TeA) mycotoxins have been extensively theoretically studied and discussed based on quantum density functional theory calculations using Gaussian 16 software package. The theoretical computation for the geometry optimization, NBOs, and the molecular docking interaction was conducted using Density Functional Theory with B3LYP/6-31+G(d,p), NBO program, and AutoDock Vina tools respectively. Charge delocalization patterns and second-order perturbation energies of the most interacting natural bond orbitals (NBOs) of these mycotoxins have also been computed and predicted. Interestingly, among the mycotoxins investigated, aflatoxin G1 is seen to give the strongest stabilization energy while Zearalenone shows the highest tendency to accept electron(s) and emodin, an emerging mycotoxin gave the best binding pose within the androgen receptor pocket with a mean binding affinity of -7.40 kcal/mol. Elsevier 2021-07-12 /pmc/articles/PMC8319581/ /pubmed/34345733 http://dx.doi.org/10.1016/j.heliyon.2021.e07544 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Agwupuye, John A. Neji, Peter A. Louis, Hitler Odey, Joseph O. Unimuke, Tomsmith O. Bisiong, Emmanuel A. Eno, Ededet A. Utsu, Patrick M. Ntui, Tabe N. Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title | Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title_full | Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title_fullStr | Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title_full_unstemmed | Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title_short | Investigation on electronic structure, vibrational spectra, NBO analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
title_sort | investigation on electronic structure, vibrational spectra, nbo analysis, and molecular docking studies of aflatoxins and selected emerging mycotoxins against wild-type androgen receptor |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8319581/ https://www.ncbi.nlm.nih.gov/pubmed/34345733 http://dx.doi.org/10.1016/j.heliyon.2021.e07544 |
work_keys_str_mv | AT agwupuyejohna investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT nejipetera investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT louishitler investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT odeyjosepho investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT unimuketomsmitho investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT bisiongemmanuela investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT enoededeta investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT utsupatrickm investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor AT ntuitaben investigationonelectronicstructurevibrationalspectranboanalysisandmoleculardockingstudiesofaflatoxinsandselectedemergingmycotoxinsagainstwildtypeandrogenreceptor |