Cargando…

DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma

Immune checkpoint inhibitors(ICIs) that activate tumor-specific immune responses bring new hope for the treatment of hepatocellular carcinoma(HCC). However, there are still some problems, such as uncertain curative effects and low objective response rates, which limit the curative effect of immunoth...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Yunfei, Wang, Xu, Deng, Xiaofan, Zhang, Yu, Liao, Rui, Li, Youzan, Yang, Hongji, Chen, Kai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8320764/
https://www.ncbi.nlm.nih.gov/pubmed/34335575
http://dx.doi.org/10.3389/fimmu.2021.676922
_version_ 1783730699655708672
author Chen, Yunfei
Wang, Xu
Deng, Xiaofan
Zhang, Yu
Liao, Rui
Li, Youzan
Yang, Hongji
Chen, Kai
author_facet Chen, Yunfei
Wang, Xu
Deng, Xiaofan
Zhang, Yu
Liao, Rui
Li, Youzan
Yang, Hongji
Chen, Kai
author_sort Chen, Yunfei
collection PubMed
description Immune checkpoint inhibitors(ICIs) that activate tumor-specific immune responses bring new hope for the treatment of hepatocellular carcinoma(HCC). However, there are still some problems, such as uncertain curative effects and low objective response rates, which limit the curative effect of immunotherapy. Therefore, it is an urgent problem to guide the use of ICIs in HCC based on molecular typing. We downloaded the The Cancer Genome Atlas-Liver hepatocellular carcinoma(TCGA-LIHC) and Mongolian-LIHC cohort. Unsupervised clustering was applied to the highly variable data regarding expression of DNA damage repair(DDR). The CIBERSORT was used to evaluate the proportions of immune cells. The connectivity map(CMap) and pRRophetic algorithms were used to predict the drug sensitivity. There were significant differences in DDR molecular subclasses in HCC(DDR1 and DDR2), and DDR1 patients had low expression of DDR-related genes, while DDR2 patients had high expression of DDR-related genes. Of the patients who received traditional treatment, DDR2 patients had significantly worse overall survival(OS) than DDR1 patients. In contrast, of the patients who received ICIs, DDR2 patients had significantly prolonged OS compared with DDR1 patients. Of the patients who received traditional treatment, patients with high DDR scores had worse OS than those with low DDR scores. However, the survival of patients with high DDR scores after receiving ICIs was significantly higher than that of patients with low DDR scores. The DDR scores of patients in the DDR2 group were significantly higher than those of patients in the DDR1 group. The tumor microenvironment(TME) of DDR2 patients was highly infiltrated by activated immune cells, immune checkpoint molecules and proinflammatory molecules and antigen presentation-related molecules. In this study, HCC patients were divided into the DDR1 and DDR2 group. Moreover, DDR status may serve as a potential biomarker to predict opposite clinical prognosis immunotherapy and non-immunotherapy in HCC.
format Online
Article
Text
id pubmed-8320764
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-83207642021-07-30 DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma Chen, Yunfei Wang, Xu Deng, Xiaofan Zhang, Yu Liao, Rui Li, Youzan Yang, Hongji Chen, Kai Front Immunol Immunology Immune checkpoint inhibitors(ICIs) that activate tumor-specific immune responses bring new hope for the treatment of hepatocellular carcinoma(HCC). However, there are still some problems, such as uncertain curative effects and low objective response rates, which limit the curative effect of immunotherapy. Therefore, it is an urgent problem to guide the use of ICIs in HCC based on molecular typing. We downloaded the The Cancer Genome Atlas-Liver hepatocellular carcinoma(TCGA-LIHC) and Mongolian-LIHC cohort. Unsupervised clustering was applied to the highly variable data regarding expression of DNA damage repair(DDR). The CIBERSORT was used to evaluate the proportions of immune cells. The connectivity map(CMap) and pRRophetic algorithms were used to predict the drug sensitivity. There were significant differences in DDR molecular subclasses in HCC(DDR1 and DDR2), and DDR1 patients had low expression of DDR-related genes, while DDR2 patients had high expression of DDR-related genes. Of the patients who received traditional treatment, DDR2 patients had significantly worse overall survival(OS) than DDR1 patients. In contrast, of the patients who received ICIs, DDR2 patients had significantly prolonged OS compared with DDR1 patients. Of the patients who received traditional treatment, patients with high DDR scores had worse OS than those with low DDR scores. However, the survival of patients with high DDR scores after receiving ICIs was significantly higher than that of patients with low DDR scores. The DDR scores of patients in the DDR2 group were significantly higher than those of patients in the DDR1 group. The tumor microenvironment(TME) of DDR2 patients was highly infiltrated by activated immune cells, immune checkpoint molecules and proinflammatory molecules and antigen presentation-related molecules. In this study, HCC patients were divided into the DDR1 and DDR2 group. Moreover, DDR status may serve as a potential biomarker to predict opposite clinical prognosis immunotherapy and non-immunotherapy in HCC. Frontiers Media S.A. 2021-07-15 /pmc/articles/PMC8320764/ /pubmed/34335575 http://dx.doi.org/10.3389/fimmu.2021.676922 Text en Copyright © 2021 Chen, Wang, Deng, Zhang, Liao, Li, Yang and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Chen, Yunfei
Wang, Xu
Deng, Xiaofan
Zhang, Yu
Liao, Rui
Li, Youzan
Yang, Hongji
Chen, Kai
DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title_full DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title_fullStr DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title_full_unstemmed DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title_short DNA Damage Repair Status Predicts Opposite Clinical Prognosis Immunotherapy and Non-Immunotherapy in Hepatocellular Carcinoma
title_sort dna damage repair status predicts opposite clinical prognosis immunotherapy and non-immunotherapy in hepatocellular carcinoma
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8320764/
https://www.ncbi.nlm.nih.gov/pubmed/34335575
http://dx.doi.org/10.3389/fimmu.2021.676922
work_keys_str_mv AT chenyunfei dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT wangxu dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT dengxiaofan dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT zhangyu dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT liaorui dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT liyouzan dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT yanghongji dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma
AT chenkai dnadamagerepairstatuspredictsoppositeclinicalprognosisimmunotherapyandnonimmunotherapyinhepatocellularcarcinoma