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Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321020/ https://www.ncbi.nlm.nih.gov/pubmed/34460738 http://dx.doi.org/10.3390/jimaging6050036 |
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author | Solís-Lemus, José Alonso Sánchez-Sánchez, Besaiz J Marcotti, Stefania Burki, Mubarik Stramer, Brian Reyes-Aldasoro, Constantino Carlos |
author_facet | Solís-Lemus, José Alonso Sánchez-Sánchez, Besaiz J Marcotti, Stefania Burki, Mubarik Stramer, Brian Reyes-Aldasoro, Constantino Carlos |
author_sort | Solís-Lemus, José Alonso |
collection | PubMed |
description | In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a segmentation and tracking algorithm into analysing the motion characteristics of cells after contact. In this particular study, the interactions between cells is characterised in the case of control embryos and Shot mutants, a candidate protein that is hypothesised to regulate contact dynamics between migrating cells. Statistical significance between control and mutant cells was found when comparing the direction of motion after contact in specific conditions. Such discoveries provide insights for future developments in combining biological experiments with computational analysis. |
format | Online Article Text |
id | pubmed-8321020 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-83210202021-08-26 Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † Solís-Lemus, José Alonso Sánchez-Sánchez, Besaiz J Marcotti, Stefania Burki, Mubarik Stramer, Brian Reyes-Aldasoro, Constantino Carlos J Imaging Article In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a segmentation and tracking algorithm into analysing the motion characteristics of cells after contact. In this particular study, the interactions between cells is characterised in the case of control embryos and Shot mutants, a candidate protein that is hypothesised to regulate contact dynamics between migrating cells. Statistical significance between control and mutant cells was found when comparing the direction of motion after contact in specific conditions. Such discoveries provide insights for future developments in combining biological experiments with computational analysis. MDPI 2020-05-20 /pmc/articles/PMC8321020/ /pubmed/34460738 http://dx.doi.org/10.3390/jimaging6050036 Text en © 2020 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Solís-Lemus, José Alonso Sánchez-Sánchez, Besaiz J Marcotti, Stefania Burki, Mubarik Stramer, Brian Reyes-Aldasoro, Constantino Carlos Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title | Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title_full | Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title_fullStr | Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title_full_unstemmed | Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title_short | Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † |
title_sort | comparative study of contact repulsion in control and mutant macrophages using a novel interaction detection † |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321020/ https://www.ncbi.nlm.nih.gov/pubmed/34460738 http://dx.doi.org/10.3390/jimaging6050036 |
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