Cargando…

Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †

In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a...

Descripción completa

Detalles Bibliográficos
Autores principales: Solís-Lemus, José Alonso, Sánchez-Sánchez, Besaiz J, Marcotti, Stefania, Burki, Mubarik, Stramer, Brian, Reyes-Aldasoro, Constantino Carlos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321020/
https://www.ncbi.nlm.nih.gov/pubmed/34460738
http://dx.doi.org/10.3390/jimaging6050036
_version_ 1783730752167346176
author Solís-Lemus, José Alonso
Sánchez-Sánchez, Besaiz J
Marcotti, Stefania
Burki, Mubarik
Stramer, Brian
Reyes-Aldasoro, Constantino Carlos
author_facet Solís-Lemus, José Alonso
Sánchez-Sánchez, Besaiz J
Marcotti, Stefania
Burki, Mubarik
Stramer, Brian
Reyes-Aldasoro, Constantino Carlos
author_sort Solís-Lemus, José Alonso
collection PubMed
description In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a segmentation and tracking algorithm into analysing the motion characteristics of cells after contact. In this particular study, the interactions between cells is characterised in the case of control embryos and Shot mutants, a candidate protein that is hypothesised to regulate contact dynamics between migrating cells. Statistical significance between control and mutant cells was found when comparing the direction of motion after contact in specific conditions. Such discoveries provide insights for future developments in combining biological experiments with computational analysis.
format Online
Article
Text
id pubmed-8321020
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-83210202021-08-26 Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection † Solís-Lemus, José Alonso Sánchez-Sánchez, Besaiz J Marcotti, Stefania Burki, Mubarik Stramer, Brian Reyes-Aldasoro, Constantino Carlos J Imaging Article In this paper, a novel method for interaction detection is presented to compare the contact dynamics of macrophages in the Drosophila embryo. The study is carried out by a framework called macrosight, which analyses the movement and interaction of migrating macrophages. The framework incorporates a segmentation and tracking algorithm into analysing the motion characteristics of cells after contact. In this particular study, the interactions between cells is characterised in the case of control embryos and Shot mutants, a candidate protein that is hypothesised to regulate contact dynamics between migrating cells. Statistical significance between control and mutant cells was found when comparing the direction of motion after contact in specific conditions. Such discoveries provide insights for future developments in combining biological experiments with computational analysis. MDPI 2020-05-20 /pmc/articles/PMC8321020/ /pubmed/34460738 http://dx.doi.org/10.3390/jimaging6050036 Text en © 2020 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Solís-Lemus, José Alonso
Sánchez-Sánchez, Besaiz J
Marcotti, Stefania
Burki, Mubarik
Stramer, Brian
Reyes-Aldasoro, Constantino Carlos
Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title_full Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title_fullStr Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title_full_unstemmed Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title_short Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection †
title_sort comparative study of contact repulsion in control and mutant macrophages using a novel interaction detection †
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321020/
https://www.ncbi.nlm.nih.gov/pubmed/34460738
http://dx.doi.org/10.3390/jimaging6050036
work_keys_str_mv AT solislemusjosealonso comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection
AT sanchezsanchezbesaizj comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection
AT marcottistefania comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection
AT burkimubarik comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection
AT stramerbrian comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection
AT reyesaldasoroconstantinocarlos comparativestudyofcontactrepulsionincontrolandmutantmacrophagesusinganovelinteractiondetection