Cargando…

Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer

BACKGROUND: The purpose of this study was to investigate the change of tumor mutation burden (TMB) in gastric cancer (GC) and its relationship with prognosis. METHODS: A total of 262 patients with GC from January 2018 to December 2019 were included in this study. All patients were in the advanced st...

Descripción completa

Detalles Bibliográficos
Autores principales: He, Xinwei, Yu, Ming, Wang, Xuezhong, Chen, Jixian, Li, Xianglin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321718/
https://www.ncbi.nlm.nih.gov/pubmed/34335754
http://dx.doi.org/10.1155/2021/3374939
_version_ 1783730911264636928
author He, Xinwei
Yu, Ming
Wang, Xuezhong
Chen, Jixian
Li, Xianglin
author_facet He, Xinwei
Yu, Ming
Wang, Xuezhong
Chen, Jixian
Li, Xianglin
author_sort He, Xinwei
collection PubMed
description BACKGROUND: The purpose of this study was to investigate the change of tumor mutation burden (TMB) in gastric cancer (GC) and its relationship with prognosis. METHODS: A total of 262 patients with GC from January 2018 to December 2019 were included in this study. All patients were in the advanced stage and were treated with surgical removal of D2 lymph nodes and dissection. Clinical data and gene expression profile data of the GC dataset in The Cancer Genome Atlas were collected. Patients were randomly divided into a high-level group and a low-level group according to the TMB of 8 mutations/Mb. TMB of GC was calculated based on cell mutation data. Cox regression model was used to evaluate the relationship between TMB and prognosis of GC patients. RESULTS: The total mutation rate of 262GC patients was 92.85%. The top 5 mutant genes were TP53, RB1, ARID1A, KMT2B, and RET. The expression level of TMB in GC patients was statistically significant with age, drinking history, and differentiation type. 94 of the 262 patients died, and 168 survived during the follow-up period. Patients with a high level of TMB had a worse prognosis than those with low level of TMB. The results of univariate and multivariate logistic analysis showed that the overall survival rate of GC patients was statistically significant with age, drinking history, clinical stage, differentiation type, and TMB. CONCLUSION: GC patients are often accompanied by changes in TMB, and its expression level is closely related to the degree of pathological differentiation, which is an independent factor affecting the prognosis of GC patients. High TMB value can evaluate the prognosis and provide a reference for the formulation of clinical treatment plans for GC patients.
format Online
Article
Text
id pubmed-8321718
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-83217182021-07-31 Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer He, Xinwei Yu, Ming Wang, Xuezhong Chen, Jixian Li, Xianglin J Oncol Research Article BACKGROUND: The purpose of this study was to investigate the change of tumor mutation burden (TMB) in gastric cancer (GC) and its relationship with prognosis. METHODS: A total of 262 patients with GC from January 2018 to December 2019 were included in this study. All patients were in the advanced stage and were treated with surgical removal of D2 lymph nodes and dissection. Clinical data and gene expression profile data of the GC dataset in The Cancer Genome Atlas were collected. Patients were randomly divided into a high-level group and a low-level group according to the TMB of 8 mutations/Mb. TMB of GC was calculated based on cell mutation data. Cox regression model was used to evaluate the relationship between TMB and prognosis of GC patients. RESULTS: The total mutation rate of 262GC patients was 92.85%. The top 5 mutant genes were TP53, RB1, ARID1A, KMT2B, and RET. The expression level of TMB in GC patients was statistically significant with age, drinking history, and differentiation type. 94 of the 262 patients died, and 168 survived during the follow-up period. Patients with a high level of TMB had a worse prognosis than those with low level of TMB. The results of univariate and multivariate logistic analysis showed that the overall survival rate of GC patients was statistically significant with age, drinking history, clinical stage, differentiation type, and TMB. CONCLUSION: GC patients are often accompanied by changes in TMB, and its expression level is closely related to the degree of pathological differentiation, which is an independent factor affecting the prognosis of GC patients. High TMB value can evaluate the prognosis and provide a reference for the formulation of clinical treatment plans for GC patients. Hindawi 2021-07-22 /pmc/articles/PMC8321718/ /pubmed/34335754 http://dx.doi.org/10.1155/2021/3374939 Text en Copyright © 2021 Xinwei He et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
He, Xinwei
Yu, Ming
Wang, Xuezhong
Chen, Jixian
Li, Xianglin
Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title_full Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title_fullStr Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title_full_unstemmed Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title_short Analysis of Threshold Change of Tumor Mutation Burden in Gastric Cancer
title_sort analysis of threshold change of tumor mutation burden in gastric cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321718/
https://www.ncbi.nlm.nih.gov/pubmed/34335754
http://dx.doi.org/10.1155/2021/3374939
work_keys_str_mv AT hexinwei analysisofthresholdchangeoftumormutationburdeningastriccancer
AT yuming analysisofthresholdchangeoftumormutationburdeningastriccancer
AT wangxuezhong analysisofthresholdchangeoftumormutationburdeningastriccancer
AT chenjixian analysisofthresholdchangeoftumormutationburdeningastriccancer
AT lixianglin analysisofthresholdchangeoftumormutationburdeningastriccancer