Cargando…
Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis)
A novel papillomavirus (PV) was detected in farmed wels catfish (Silurus glanis) in Hungary showing clinical signs resembling those of wels catfish herpesvirus disease. The whole genome of Silurus glanis papillomavirus 1 (SgPV1) was identified using next-generation sequencing. The 5,612-bp complete...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321979/ https://www.ncbi.nlm.nih.gov/pubmed/34115213 http://dx.doi.org/10.1007/s00705-021-05123-w |
_version_ | 1783730950961627136 |
---|---|
author | Surján, András Fónagy, Eszter Eszterbauer, Edit Harrach, Balázs Doszpoly, Andor |
author_facet | Surján, András Fónagy, Eszter Eszterbauer, Edit Harrach, Balázs Doszpoly, Andor |
author_sort | Surján, András |
collection | PubMed |
description | A novel papillomavirus (PV) was detected in farmed wels catfish (Silurus glanis) in Hungary showing clinical signs resembling those of wels catfish herpesvirus disease. The whole genome of Silurus glanis papillomavirus 1 (SgPV1) was identified using next-generation sequencing. The 5,612-bp complete genome contains four predicted protein coding regions (E1, E2, L1, and L2), which seem to have homologues in every PV genome sequenced to date. Five complete fish PV genome sequences are available in the GenBank database. Their genomes range between 5,748 and 6,086 bp and contain the minimal PV backbone genes E1, E2, L2, and L1, unlike PVs of higher vertebrates, which have larger genomes (6.8-8.6 kbp) and additional (onco)genes. Considering the current species demarcation criteria for the family Papillomaviridae, the establishment of a novel species named "Nunpapillomavirus siluri" is proposed for the SgPV1 in a novel genus, "Nunpapillomavirus", in the subfamily Secondpapillomavirinae. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00705-021-05123-w. |
format | Online Article Text |
id | pubmed-8321979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-83219792021-08-19 Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) Surján, András Fónagy, Eszter Eszterbauer, Edit Harrach, Balázs Doszpoly, Andor Arch Virol Annotated Sequence Record A novel papillomavirus (PV) was detected in farmed wels catfish (Silurus glanis) in Hungary showing clinical signs resembling those of wels catfish herpesvirus disease. The whole genome of Silurus glanis papillomavirus 1 (SgPV1) was identified using next-generation sequencing. The 5,612-bp complete genome contains four predicted protein coding regions (E1, E2, L1, and L2), which seem to have homologues in every PV genome sequenced to date. Five complete fish PV genome sequences are available in the GenBank database. Their genomes range between 5,748 and 6,086 bp and contain the minimal PV backbone genes E1, E2, L2, and L1, unlike PVs of higher vertebrates, which have larger genomes (6.8-8.6 kbp) and additional (onco)genes. Considering the current species demarcation criteria for the family Papillomaviridae, the establishment of a novel species named "Nunpapillomavirus siluri" is proposed for the SgPV1 in a novel genus, "Nunpapillomavirus", in the subfamily Secondpapillomavirinae. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00705-021-05123-w. Springer Vienna 2021-06-11 2021 /pmc/articles/PMC8321979/ /pubmed/34115213 http://dx.doi.org/10.1007/s00705-021-05123-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Annotated Sequence Record Surján, András Fónagy, Eszter Eszterbauer, Edit Harrach, Balázs Doszpoly, Andor Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title | Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title_full | Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title_fullStr | Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title_full_unstemmed | Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title_short | Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis) |
title_sort | complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (silurus glanis) |
topic | Annotated Sequence Record |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321979/ https://www.ncbi.nlm.nih.gov/pubmed/34115213 http://dx.doi.org/10.1007/s00705-021-05123-w |
work_keys_str_mv | AT surjanandras completegenomesequenceofanovelfishpapillomavirusdetectedinfarmedwelscatfishsilurusglanis AT fonagyeszter completegenomesequenceofanovelfishpapillomavirusdetectedinfarmedwelscatfishsilurusglanis AT eszterbaueredit completegenomesequenceofanovelfishpapillomavirusdetectedinfarmedwelscatfishsilurusglanis AT harrachbalazs completegenomesequenceofanovelfishpapillomavirusdetectedinfarmedwelscatfishsilurusglanis AT doszpolyandor completegenomesequenceofanovelfishpapillomavirusdetectedinfarmedwelscatfishsilurusglanis |