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Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network

Purpose: The purpose of this study was to develop and evaluate lung cancer segmentation with a pretrained model and transfer learning. The pretrained model was constructed from an artificial dataset generated using a generative adversarial network (GAN). Materials and Methods: Three public datasets...

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Autores principales: Nishio, Mizuho, Fujimoto, Koji, Matsuo, Hidetoshi, Muramatsu, Chisako, Sakamoto, Ryo, Fujita, Hiroshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322116/
https://www.ncbi.nlm.nih.gov/pubmed/34337394
http://dx.doi.org/10.3389/frai.2021.694815
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author Nishio, Mizuho
Fujimoto, Koji
Matsuo, Hidetoshi
Muramatsu, Chisako
Sakamoto, Ryo
Fujita, Hiroshi
author_facet Nishio, Mizuho
Fujimoto, Koji
Matsuo, Hidetoshi
Muramatsu, Chisako
Sakamoto, Ryo
Fujita, Hiroshi
author_sort Nishio, Mizuho
collection PubMed
description Purpose: The purpose of this study was to develop and evaluate lung cancer segmentation with a pretrained model and transfer learning. The pretrained model was constructed from an artificial dataset generated using a generative adversarial network (GAN). Materials and Methods: Three public datasets containing images of lung nodules/lung cancers were used: LUNA16 dataset, Decathlon lung dataset, and NSCLC radiogenomics. The LUNA16 dataset was used to generate an artificial dataset for lung cancer segmentation with the help of the GAN and 3D graph cut. Pretrained models were then constructed from the artificial dataset. Subsequently, the main segmentation model was constructed from the pretrained models and the Decathlon lung dataset. Finally, the NSCLC radiogenomics dataset was used to evaluate the main segmentation model. The Dice similarity coefficient (DSC) was used as a metric to evaluate the segmentation performance. Results: The mean DSC for the NSCLC radiogenomics dataset improved overall when using the pretrained models. At maximum, the mean DSC was 0.09 higher with the pretrained model than that without it. Conclusion: The proposed method comprising an artificial dataset and a pretrained model can improve lung cancer segmentation as confirmed in terms of the DSC metric. Moreover, the construction of the artificial dataset for the segmentation using the GAN and 3D graph cut was found to be feasible.
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spelling pubmed-83221162021-07-31 Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network Nishio, Mizuho Fujimoto, Koji Matsuo, Hidetoshi Muramatsu, Chisako Sakamoto, Ryo Fujita, Hiroshi Front Artif Intell Artificial Intelligence Purpose: The purpose of this study was to develop and evaluate lung cancer segmentation with a pretrained model and transfer learning. The pretrained model was constructed from an artificial dataset generated using a generative adversarial network (GAN). Materials and Methods: Three public datasets containing images of lung nodules/lung cancers were used: LUNA16 dataset, Decathlon lung dataset, and NSCLC radiogenomics. The LUNA16 dataset was used to generate an artificial dataset for lung cancer segmentation with the help of the GAN and 3D graph cut. Pretrained models were then constructed from the artificial dataset. Subsequently, the main segmentation model was constructed from the pretrained models and the Decathlon lung dataset. Finally, the NSCLC radiogenomics dataset was used to evaluate the main segmentation model. The Dice similarity coefficient (DSC) was used as a metric to evaluate the segmentation performance. Results: The mean DSC for the NSCLC radiogenomics dataset improved overall when using the pretrained models. At maximum, the mean DSC was 0.09 higher with the pretrained model than that without it. Conclusion: The proposed method comprising an artificial dataset and a pretrained model can improve lung cancer segmentation as confirmed in terms of the DSC metric. Moreover, the construction of the artificial dataset for the segmentation using the GAN and 3D graph cut was found to be feasible. Frontiers Media S.A. 2021-07-16 /pmc/articles/PMC8322116/ /pubmed/34337394 http://dx.doi.org/10.3389/frai.2021.694815 Text en Copyright © 2021 Nishio, Fujimoto, Matsuo, Muramatsu, Sakamoto and Fujita. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Artificial Intelligence
Nishio, Mizuho
Fujimoto, Koji
Matsuo, Hidetoshi
Muramatsu, Chisako
Sakamoto, Ryo
Fujita, Hiroshi
Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title_full Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title_fullStr Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title_full_unstemmed Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title_short Lung Cancer Segmentation With Transfer Learning: Usefulness of a Pretrained Model Constructed From an Artificial Dataset Generated Using a Generative Adversarial Network
title_sort lung cancer segmentation with transfer learning: usefulness of a pretrained model constructed from an artificial dataset generated using a generative adversarial network
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322116/
https://www.ncbi.nlm.nih.gov/pubmed/34337394
http://dx.doi.org/10.3389/frai.2021.694815
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