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Higher-order temporal network effects through triplet evolution
We study the evolution of networks through ‘triplets’—three-node graphlets. We develop a method to compute a transition matrix to describe the evolution of triplets in temporal networks. To identify the importance of higher-order interactions in the evolution of networks, we compare both artificial...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322211/ https://www.ncbi.nlm.nih.gov/pubmed/34326379 http://dx.doi.org/10.1038/s41598-021-94389-w |
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author | Yao, Qing Chen, Bingsheng Evans, Tim S. Christensen, Kim |
author_facet | Yao, Qing Chen, Bingsheng Evans, Tim S. Christensen, Kim |
author_sort | Yao, Qing |
collection | PubMed |
description | We study the evolution of networks through ‘triplets’—three-node graphlets. We develop a method to compute a transition matrix to describe the evolution of triplets in temporal networks. To identify the importance of higher-order interactions in the evolution of networks, we compare both artificial and real-world data to a model based on pairwise interactions only. The significant differences between the computed matrix and the calculated matrix from the fitted parameters demonstrate that non-pairwise interactions exist for various real-world systems in space and time, such as our data sets. Furthermore, this also reveals that different patterns of higher-order interaction are involved in different real-world situations. To test our approach, we then use these transition matrices as the basis of a link prediction algorithm. We investigate our algorithm’s performance on four temporal networks, comparing our approach against ten other link prediction methods. Our results show that higher-order interactions in both space and time play a crucial role in the evolution of networks as we find our method, along with two other methods based on non-local interactions, give the best overall performance. The results also confirm the concept that the higher-order interaction patterns, i.e., triplet dynamics, can help us understand and predict the evolution of different real-world systems. |
format | Online Article Text |
id | pubmed-8322211 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83222112021-07-30 Higher-order temporal network effects through triplet evolution Yao, Qing Chen, Bingsheng Evans, Tim S. Christensen, Kim Sci Rep Article We study the evolution of networks through ‘triplets’—three-node graphlets. We develop a method to compute a transition matrix to describe the evolution of triplets in temporal networks. To identify the importance of higher-order interactions in the evolution of networks, we compare both artificial and real-world data to a model based on pairwise interactions only. The significant differences between the computed matrix and the calculated matrix from the fitted parameters demonstrate that non-pairwise interactions exist for various real-world systems in space and time, such as our data sets. Furthermore, this also reveals that different patterns of higher-order interaction are involved in different real-world situations. To test our approach, we then use these transition matrices as the basis of a link prediction algorithm. We investigate our algorithm’s performance on four temporal networks, comparing our approach against ten other link prediction methods. Our results show that higher-order interactions in both space and time play a crucial role in the evolution of networks as we find our method, along with two other methods based on non-local interactions, give the best overall performance. The results also confirm the concept that the higher-order interaction patterns, i.e., triplet dynamics, can help us understand and predict the evolution of different real-world systems. Nature Publishing Group UK 2021-07-29 /pmc/articles/PMC8322211/ /pubmed/34326379 http://dx.doi.org/10.1038/s41598-021-94389-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Yao, Qing Chen, Bingsheng Evans, Tim S. Christensen, Kim Higher-order temporal network effects through triplet evolution |
title | Higher-order temporal network effects through triplet evolution |
title_full | Higher-order temporal network effects through triplet evolution |
title_fullStr | Higher-order temporal network effects through triplet evolution |
title_full_unstemmed | Higher-order temporal network effects through triplet evolution |
title_short | Higher-order temporal network effects through triplet evolution |
title_sort | higher-order temporal network effects through triplet evolution |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322211/ https://www.ncbi.nlm.nih.gov/pubmed/34326379 http://dx.doi.org/10.1038/s41598-021-94389-w |
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