Cargando…

The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19

In 2020 the outbreak of Covid-19 influenced lives of billions of people all around the globe and motivated governments of different countries to revisit the current situation with regards to public healthcare systems and to methods used in modern medicine. As the workload on radiologists and physici...

Descripción completa

Detalles Bibliográficos
Autores principales: Lashchenova, D., Gromov, A., Konushin, A., Mesheryakova, A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pleiades Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322634/
http://dx.doi.org/10.1134/S0361768821030063
_version_ 1783731093366636544
author Lashchenova, D.
Gromov, A.
Konushin, A.
Mesheryakova, A.
author_facet Lashchenova, D.
Gromov, A.
Konushin, A.
Mesheryakova, A.
author_sort Lashchenova, D.
collection PubMed
description In 2020 the outbreak of Covid-19 influenced lives of billions of people all around the globe and motivated governments of different countries to revisit the current situation with regards to public healthcare systems and to methods used in modern medicine. As the workload on radiologists and physicians increased, so did the demand on systems that automatically analyse medical images and detect pathologies. Many current computer vision papers assume that the solution would be integrated into a healthcare system. However improvement according to “classic” metrics like mAP or IoU does not necessarily mean improvement from the radiologist’s point of view. In this paper we suggest that while calculating metrics, averaging should be performed not by all studies, but by different groups of studies, in order to be close to human perception of a quality of a segmentation. And that we should count the number of false positive components, found outside lungs, because the presence of such components is negatively perceived by radiologists. Also we propose a method that improves the segmentation of lung pathologies and pleural effusion according to the points given above.
format Online
Article
Text
id pubmed-8322634
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Pleiades Publishing
record_format MEDLINE/PubMed
spelling pubmed-83226342021-07-30 The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19 Lashchenova, D. Gromov, A. Konushin, A. Mesheryakova, A. Program Comput Soft Article In 2020 the outbreak of Covid-19 influenced lives of billions of people all around the globe and motivated governments of different countries to revisit the current situation with regards to public healthcare systems and to methods used in modern medicine. As the workload on radiologists and physicians increased, so did the demand on systems that automatically analyse medical images and detect pathologies. Many current computer vision papers assume that the solution would be integrated into a healthcare system. However improvement according to “classic” metrics like mAP or IoU does not necessarily mean improvement from the radiologist’s point of view. In this paper we suggest that while calculating metrics, averaging should be performed not by all studies, but by different groups of studies, in order to be close to human perception of a quality of a segmentation. And that we should count the number of false positive components, found outside lungs, because the presence of such components is negatively perceived by radiologists. Also we propose a method that improves the segmentation of lung pathologies and pleural effusion according to the points given above. Pleiades Publishing 2021-07-30 2021 /pmc/articles/PMC8322634/ http://dx.doi.org/10.1134/S0361768821030063 Text en © Pleiades Publishing, Ltd. 2021, ISSN 0361-7688, Programming and Computer Software, 2021, Vol. 47, No. 4, pp. 327–333. © Pleiades Publishing, Ltd., 2021.Russian Text © The Author(s), 2021, published in Programmirovanie, 2021, Vol. 47, No. 4. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Lashchenova, D.
Gromov, A.
Konushin, A.
Mesheryakova, A.
The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title_full The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title_fullStr The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title_full_unstemmed The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title_short The Improvement of Segmentation of Lung Pathologies and Pleural Effusion on CT-scans of Patients with Covid-19
title_sort improvement of segmentation of lung pathologies and pleural effusion on ct-scans of patients with covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322634/
http://dx.doi.org/10.1134/S0361768821030063
work_keys_str_mv AT lashchenovad theimprovementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT gromova theimprovementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT konushina theimprovementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT mesheryakovaa theimprovementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT lashchenovad improvementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT gromova improvementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT konushina improvementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19
AT mesheryakovaa improvementofsegmentationoflungpathologiesandpleuraleffusiononctscansofpatientswithcovid19