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New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old)...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322707/ https://www.ncbi.nlm.nih.gov/pubmed/34319387 http://dx.doi.org/10.1167/tvst.10.8.26 |
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author | Lanca, Carla Kassam, Irfahan Patasova, Karina Foo, Li-Lian Li, Jonathan Ang, Marcus Hoang, Quan V. Teo, Yik-Ying Hysi, Pirro G. Saw, Seang-Mei |
author_facet | Lanca, Carla Kassam, Irfahan Patasova, Karina Foo, Li-Lian Li, Jonathan Ang, Marcus Hoang, Quan V. Teo, Yik-Ying Hysi, Pirro G. Saw, Seang-Mei |
author_sort | Lanca, Carla |
collection | PubMed |
description | PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old). Cycloplegic autorefraction, ultrasound biometry, Illumina HumanHap 550, or 550 Duo Beadarrays, demographics, and environmental factors data were obtained. The PRS was generated from the Consortium for Refractive Error and Myopia genomewide association study (n = 542,934) and the Strabismus, Amblyopia, and Refractive Error in Singapore children Study (n = 500). The Growing Up in Singapore Towards healthy Outcomes Cohort study (n = 339) was the replication cohort. The outcome was teenage HM (≤ −5.00 D) with predictive performance assessed using the area under the curve (AUC). RESULTS: Mean baseline age ± SD was 7.85 ± 0.84 (n = 1004) and 571 attended the teenage visit; 23.3% had HM. In multivariate analysis, the PRS was associated with a myopic spherical equivalent with an incremental R(2) of 0.041 (95% confidence interval [CI] = 0.010, 0.073; P < 0.001). AUC for HM (0.77 [95% CI = 0.71–0.83]) performed better (P = 0.02) with the PRS compared with a model without (0.72 [95% CI = 0.65, 0.78]). Children at the top 25% PRS risk had a 2.34-fold-greater risk of HM (95% CI = 1.53, 3.55; P < 0.001). CONCLUSIONS: The new Asian PRS improved the predictive performance to detect children at risk of HM. TRANSLATIONAL RELEVANCE: Clinicians may use the PRS with other predictive factors to identify high risk children and guide interventions to reduce the risk of HM later in life. |
format | Online Article Text |
id | pubmed-8322707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-83227072021-08-13 New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children Lanca, Carla Kassam, Irfahan Patasova, Karina Foo, Li-Lian Li, Jonathan Ang, Marcus Hoang, Quan V. Teo, Yik-Ying Hysi, Pirro G. Saw, Seang-Mei Transl Vis Sci Technol Article PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old). Cycloplegic autorefraction, ultrasound biometry, Illumina HumanHap 550, or 550 Duo Beadarrays, demographics, and environmental factors data were obtained. The PRS was generated from the Consortium for Refractive Error and Myopia genomewide association study (n = 542,934) and the Strabismus, Amblyopia, and Refractive Error in Singapore children Study (n = 500). The Growing Up in Singapore Towards healthy Outcomes Cohort study (n = 339) was the replication cohort. The outcome was teenage HM (≤ −5.00 D) with predictive performance assessed using the area under the curve (AUC). RESULTS: Mean baseline age ± SD was 7.85 ± 0.84 (n = 1004) and 571 attended the teenage visit; 23.3% had HM. In multivariate analysis, the PRS was associated with a myopic spherical equivalent with an incremental R(2) of 0.041 (95% confidence interval [CI] = 0.010, 0.073; P < 0.001). AUC for HM (0.77 [95% CI = 0.71–0.83]) performed better (P = 0.02) with the PRS compared with a model without (0.72 [95% CI = 0.65, 0.78]). Children at the top 25% PRS risk had a 2.34-fold-greater risk of HM (95% CI = 1.53, 3.55; P < 0.001). CONCLUSIONS: The new Asian PRS improved the predictive performance to detect children at risk of HM. TRANSLATIONAL RELEVANCE: Clinicians may use the PRS with other predictive factors to identify high risk children and guide interventions to reduce the risk of HM later in life. The Association for Research in Vision and Ophthalmology 2021-07-28 /pmc/articles/PMC8322707/ /pubmed/34319387 http://dx.doi.org/10.1167/tvst.10.8.26 Text en Copyright 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Article Lanca, Carla Kassam, Irfahan Patasova, Karina Foo, Li-Lian Li, Jonathan Ang, Marcus Hoang, Quan V. Teo, Yik-Ying Hysi, Pirro G. Saw, Seang-Mei New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title | New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title_full | New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title_fullStr | New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title_full_unstemmed | New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title_short | New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children |
title_sort | new polygenic risk score to predict high myopia in singapore chinese children |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322707/ https://www.ncbi.nlm.nih.gov/pubmed/34319387 http://dx.doi.org/10.1167/tvst.10.8.26 |
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