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New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children

PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old)...

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Autores principales: Lanca, Carla, Kassam, Irfahan, Patasova, Karina, Foo, Li-Lian, Li, Jonathan, Ang, Marcus, Hoang, Quan V., Teo, Yik-Ying, Hysi, Pirro G., Saw, Seang-Mei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322707/
https://www.ncbi.nlm.nih.gov/pubmed/34319387
http://dx.doi.org/10.1167/tvst.10.8.26
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author Lanca, Carla
Kassam, Irfahan
Patasova, Karina
Foo, Li-Lian
Li, Jonathan
Ang, Marcus
Hoang, Quan V.
Teo, Yik-Ying
Hysi, Pirro G.
Saw, Seang-Mei
author_facet Lanca, Carla
Kassam, Irfahan
Patasova, Karina
Foo, Li-Lian
Li, Jonathan
Ang, Marcus
Hoang, Quan V.
Teo, Yik-Ying
Hysi, Pirro G.
Saw, Seang-Mei
author_sort Lanca, Carla
collection PubMed
description PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old). Cycloplegic autorefraction, ultrasound biometry, Illumina HumanHap 550, or 550 Duo Beadarrays, demographics, and environmental factors data were obtained. The PRS was generated from the Consortium for Refractive Error and Myopia genomewide association study (n = 542,934) and the Strabismus, Amblyopia, and Refractive Error in Singapore children Study (n = 500). The Growing Up in Singapore Towards healthy Outcomes Cohort study (n = 339) was the replication cohort. The outcome was teenage HM (≤ −5.00 D) with predictive performance assessed using the area under the curve (AUC). RESULTS: Mean baseline age ± SD was 7.85 ± 0.84 (n = 1004) and 571 attended the teenage visit; 23.3% had HM. In multivariate analysis, the PRS was associated with a myopic spherical equivalent with an incremental R(2) of 0.041 (95% confidence interval [CI] = 0.010, 0.073; P < 0.001). AUC for HM (0.77 [95% CI = 0.71–0.83]) performed better (P = 0.02) with the PRS compared with a model without (0.72 [95% CI = 0.65, 0.78]). Children at the top 25% PRS risk had a 2.34-fold-greater risk of HM (95% CI = 1.53, 3.55; P < 0.001). CONCLUSIONS: The new Asian PRS improved the predictive performance to detect children at risk of HM. TRANSLATIONAL RELEVANCE: Clinicians may use the PRS with other predictive factors to identify high risk children and guide interventions to reduce the risk of HM later in life.
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spelling pubmed-83227072021-08-13 New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children Lanca, Carla Kassam, Irfahan Patasova, Karina Foo, Li-Lian Li, Jonathan Ang, Marcus Hoang, Quan V. Teo, Yik-Ying Hysi, Pirro G. Saw, Seang-Mei Transl Vis Sci Technol Article PURPOSE: The purpose of this study was to develop an Asian polygenic risk score (PRS) to predict high myopia (HM) in Chinese children in the Singapore Cohort of Risk factors for Myopia (SCORM) cohort. METHODS: We included children followed from 6 to 11 years old until teenage years (12–18 years old). Cycloplegic autorefraction, ultrasound biometry, Illumina HumanHap 550, or 550 Duo Beadarrays, demographics, and environmental factors data were obtained. The PRS was generated from the Consortium for Refractive Error and Myopia genomewide association study (n = 542,934) and the Strabismus, Amblyopia, and Refractive Error in Singapore children Study (n = 500). The Growing Up in Singapore Towards healthy Outcomes Cohort study (n = 339) was the replication cohort. The outcome was teenage HM (≤ −5.00 D) with predictive performance assessed using the area under the curve (AUC). RESULTS: Mean baseline age ± SD was 7.85 ± 0.84 (n = 1004) and 571 attended the teenage visit; 23.3% had HM. In multivariate analysis, the PRS was associated with a myopic spherical equivalent with an incremental R(2) of 0.041 (95% confidence interval [CI] = 0.010, 0.073; P < 0.001). AUC for HM (0.77 [95% CI = 0.71–0.83]) performed better (P = 0.02) with the PRS compared with a model without (0.72 [95% CI = 0.65, 0.78]). Children at the top 25% PRS risk had a 2.34-fold-greater risk of HM (95% CI = 1.53, 3.55; P < 0.001). CONCLUSIONS: The new Asian PRS improved the predictive performance to detect children at risk of HM. TRANSLATIONAL RELEVANCE: Clinicians may use the PRS with other predictive factors to identify high risk children and guide interventions to reduce the risk of HM later in life. The Association for Research in Vision and Ophthalmology 2021-07-28 /pmc/articles/PMC8322707/ /pubmed/34319387 http://dx.doi.org/10.1167/tvst.10.8.26 Text en Copyright 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Article
Lanca, Carla
Kassam, Irfahan
Patasova, Karina
Foo, Li-Lian
Li, Jonathan
Ang, Marcus
Hoang, Quan V.
Teo, Yik-Ying
Hysi, Pirro G.
Saw, Seang-Mei
New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title_full New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title_fullStr New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title_full_unstemmed New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title_short New Polygenic Risk Score to Predict High Myopia in Singapore Chinese Children
title_sort new polygenic risk score to predict high myopia in singapore chinese children
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8322707/
https://www.ncbi.nlm.nih.gov/pubmed/34319387
http://dx.doi.org/10.1167/tvst.10.8.26
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