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Advances in the computational landscape for repurposed drugs against COVID-19

The COVID-19 pandemic has caused millions of deaths and massive societal distress worldwide. Therapeutic solutions are urgently needed, but de novo drug development remains a lengthy process. One promising alternative is computational drug repurposing, which enables the prioritization of existing co...

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Autores principales: Aronskyy, Illya, Masoudi-Sobhanzadeh, Yosef, Cappuccio, Antonio, Zaslavsky, Elena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8323501/
https://www.ncbi.nlm.nih.gov/pubmed/34339864
http://dx.doi.org/10.1016/j.drudis.2021.07.026
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author Aronskyy, Illya
Masoudi-Sobhanzadeh, Yosef
Cappuccio, Antonio
Zaslavsky, Elena
author_facet Aronskyy, Illya
Masoudi-Sobhanzadeh, Yosef
Cappuccio, Antonio
Zaslavsky, Elena
author_sort Aronskyy, Illya
collection PubMed
description The COVID-19 pandemic has caused millions of deaths and massive societal distress worldwide. Therapeutic solutions are urgently needed, but de novo drug development remains a lengthy process. One promising alternative is computational drug repurposing, which enables the prioritization of existing compounds through fast in silico analyses. Recent efforts based on molecular docking, machine learning, and network analysis have produced actionable predictions. Some predicted drugs, targeting viral proteins and pathological host pathways are undergoing clinical trials. Here, we review this work, highlight drugs with high predicted efficacy and classify their mechanisms of action. We discuss the strengths and limitations of the published methodologies and outline possible future directions. Finally, we curate a list of COVID-19 data portals and other repositories that could be used to accelerate future research.
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spelling pubmed-83235012021-07-30 Advances in the computational landscape for repurposed drugs against COVID-19 Aronskyy, Illya Masoudi-Sobhanzadeh, Yosef Cappuccio, Antonio Zaslavsky, Elena Drug Discov Today Keynote (Green) The COVID-19 pandemic has caused millions of deaths and massive societal distress worldwide. Therapeutic solutions are urgently needed, but de novo drug development remains a lengthy process. One promising alternative is computational drug repurposing, which enables the prioritization of existing compounds through fast in silico analyses. Recent efforts based on molecular docking, machine learning, and network analysis have produced actionable predictions. Some predicted drugs, targeting viral proteins and pathological host pathways are undergoing clinical trials. Here, we review this work, highlight drugs with high predicted efficacy and classify their mechanisms of action. We discuss the strengths and limitations of the published methodologies and outline possible future directions. Finally, we curate a list of COVID-19 data portals and other repositories that could be used to accelerate future research. Elsevier Ltd. 2021-12 2021-07-30 /pmc/articles/PMC8323501/ /pubmed/34339864 http://dx.doi.org/10.1016/j.drudis.2021.07.026 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Keynote (Green)
Aronskyy, Illya
Masoudi-Sobhanzadeh, Yosef
Cappuccio, Antonio
Zaslavsky, Elena
Advances in the computational landscape for repurposed drugs against COVID-19
title Advances in the computational landscape for repurposed drugs against COVID-19
title_full Advances in the computational landscape for repurposed drugs against COVID-19
title_fullStr Advances in the computational landscape for repurposed drugs against COVID-19
title_full_unstemmed Advances in the computational landscape for repurposed drugs against COVID-19
title_short Advances in the computational landscape for repurposed drugs against COVID-19
title_sort advances in the computational landscape for repurposed drugs against covid-19
topic Keynote (Green)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8323501/
https://www.ncbi.nlm.nih.gov/pubmed/34339864
http://dx.doi.org/10.1016/j.drudis.2021.07.026
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