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Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining
BACKGROUND: Pancreatic cancer is a fatal malignancy of the digestive system and the 5-year survival rate remains low. Therefore, new molecular therapeutic targets are required to improve treatments, prognosis, and the survival of patients. N6-methyladenosine (m6A) is the most prevalent reversible me...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325265/ https://www.ncbi.nlm.nih.gov/pubmed/34330301 http://dx.doi.org/10.1186/s12967-021-03001-2 |
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author | Zeng, Juan Zhang, Heying Tan, Yonggang Wang, Zhe Li, Yunwei Yang, Xianghong |
author_facet | Zeng, Juan Zhang, Heying Tan, Yonggang Wang, Zhe Li, Yunwei Yang, Xianghong |
author_sort | Zeng, Juan |
collection | PubMed |
description | BACKGROUND: Pancreatic cancer is a fatal malignancy of the digestive system and the 5-year survival rate remains low. Therefore, new molecular therapeutic targets are required to improve treatments, prognosis, and the survival of patients. N6-methyladenosine (m6A) is the most prevalent reversible methylation in mammalian messenger RNA (mRNA) and has critical roles in the tumorigenesis and metastasis of various malignancies. However, the role of m6A in pancreatic cancer is still unclear. Exploring genetic alterations and functional networks of m6A regulators in pancreatic cancer may provide new strategies for its treatment. METHODS: In this study, we used data from the Cancer Genome Atlas (TCGA) database and other public databases through cBioPortal, LinkedOmics, UALCAN, GEPIA, STRING, and the database for annotation, visualization, and integrated discovery (DAVID) to systematically analyze the molecular alterations and functions of 20 main m6A regulators in pancreatic cancer. RESULTS: We found that m6A regulators had widespread genetic alterations, and that their expression levels were significantly correlated with pancreatic cancer malignancy. Moreover, m6A regulators were associated with the prognosis of pancreatic cancer patients. CONCLUSIONS: m6A regulators play a crucial part in the occurrence and development of pancreatic cancer. Our study will guide further studies of m6A RNA modification in pancreatic cancer and could potentially provide new strategies for pancreatic cancer treatment. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-021-03001-2. |
format | Online Article Text |
id | pubmed-8325265 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-83252652021-08-02 Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining Zeng, Juan Zhang, Heying Tan, Yonggang Wang, Zhe Li, Yunwei Yang, Xianghong J Transl Med Research BACKGROUND: Pancreatic cancer is a fatal malignancy of the digestive system and the 5-year survival rate remains low. Therefore, new molecular therapeutic targets are required to improve treatments, prognosis, and the survival of patients. N6-methyladenosine (m6A) is the most prevalent reversible methylation in mammalian messenger RNA (mRNA) and has critical roles in the tumorigenesis and metastasis of various malignancies. However, the role of m6A in pancreatic cancer is still unclear. Exploring genetic alterations and functional networks of m6A regulators in pancreatic cancer may provide new strategies for its treatment. METHODS: In this study, we used data from the Cancer Genome Atlas (TCGA) database and other public databases through cBioPortal, LinkedOmics, UALCAN, GEPIA, STRING, and the database for annotation, visualization, and integrated discovery (DAVID) to systematically analyze the molecular alterations and functions of 20 main m6A regulators in pancreatic cancer. RESULTS: We found that m6A regulators had widespread genetic alterations, and that their expression levels were significantly correlated with pancreatic cancer malignancy. Moreover, m6A regulators were associated with the prognosis of pancreatic cancer patients. CONCLUSIONS: m6A regulators play a crucial part in the occurrence and development of pancreatic cancer. Our study will guide further studies of m6A RNA modification in pancreatic cancer and could potentially provide new strategies for pancreatic cancer treatment. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-021-03001-2. BioMed Central 2021-07-30 /pmc/articles/PMC8325265/ /pubmed/34330301 http://dx.doi.org/10.1186/s12967-021-03001-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Zeng, Juan Zhang, Heying Tan, Yonggang Wang, Zhe Li, Yunwei Yang, Xianghong Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title | Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title_full | Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title_fullStr | Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title_full_unstemmed | Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title_short | Genetic alterations and functional networks of m6A RNA methylation regulators in pancreatic cancer based on data mining |
title_sort | genetic alterations and functional networks of m6a rna methylation regulators in pancreatic cancer based on data mining |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325265/ https://www.ncbi.nlm.nih.gov/pubmed/34330301 http://dx.doi.org/10.1186/s12967-021-03001-2 |
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