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Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images

The current COVID-19 pandemic, that has caused more than 100 million cases as well as more than two million deaths worldwide, demands the development of fast and accurate diagnostic methods despite the lack of available samples. This disease mainly affects the respiratory system of the patients and...

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Autores principales: Morís, Daniel Iglesias, de Moura Ramos, José Joaquim, Buján, Jorge Novo, Hortas, Marcos Ortega
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325379/
https://www.ncbi.nlm.nih.gov/pubmed/34366577
http://dx.doi.org/10.1016/j.eswa.2021.115681
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author Morís, Daniel Iglesias
de Moura Ramos, José Joaquim
Buján, Jorge Novo
Hortas, Marcos Ortega
author_facet Morís, Daniel Iglesias
de Moura Ramos, José Joaquim
Buján, Jorge Novo
Hortas, Marcos Ortega
author_sort Morís, Daniel Iglesias
collection PubMed
description The current COVID-19 pandemic, that has caused more than 100 million cases as well as more than two million deaths worldwide, demands the development of fast and accurate diagnostic methods despite the lack of available samples. This disease mainly affects the respiratory system of the patients and can lead to pneumonia and to severe cases of acute respiratory syndrome that result in the formation of several pathological structures in the lungs. These pathological structures can be explored taking advantage of chest X-ray imaging. As a recommendation for the health services, portable chest X-ray devices should be used instead of conventional fixed machinery, in order to prevent the spread of the pathogen. However, portable devices present several problems (specially those related with capture quality). Moreover, the subjectivity and the fatigue of the clinicians lead to a very difficult diagnostic process. To overcome that, computer-aided methodologies can be very useful even taking into account the lack of available samples that the COVID-19 affectation shows. In this work, we propose an improvement in the performance of COVID-19 screening, taking advantage of several cycle generative adversarial networks to generate useful and relevant synthetic images to solve the lack of COVID-19 samples, in the context of poor quality and low detail datasets obtained from portable devices. For validating this proposal for improved COVID-19 screening, several experiments were conducted. The results demonstrate that this data augmentation strategy improves the performance of a previous COVID-19 screening proposal, achieving an accuracy of 98.61% when distinguishing among NON-COVID-19 (i.e. normal control samples and samples with pathologies others than COVID-19) and genuine COVID-19 samples. It is remarkable that this methodology can be extrapolated to other pulmonary pathologies and even other medical imaging domains to overcome the data scarcity.
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spelling pubmed-83253792021-08-02 Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images Morís, Daniel Iglesias de Moura Ramos, José Joaquim Buján, Jorge Novo Hortas, Marcos Ortega Expert Syst Appl Article The current COVID-19 pandemic, that has caused more than 100 million cases as well as more than two million deaths worldwide, demands the development of fast and accurate diagnostic methods despite the lack of available samples. This disease mainly affects the respiratory system of the patients and can lead to pneumonia and to severe cases of acute respiratory syndrome that result in the formation of several pathological structures in the lungs. These pathological structures can be explored taking advantage of chest X-ray imaging. As a recommendation for the health services, portable chest X-ray devices should be used instead of conventional fixed machinery, in order to prevent the spread of the pathogen. However, portable devices present several problems (specially those related with capture quality). Moreover, the subjectivity and the fatigue of the clinicians lead to a very difficult diagnostic process. To overcome that, computer-aided methodologies can be very useful even taking into account the lack of available samples that the COVID-19 affectation shows. In this work, we propose an improvement in the performance of COVID-19 screening, taking advantage of several cycle generative adversarial networks to generate useful and relevant synthetic images to solve the lack of COVID-19 samples, in the context of poor quality and low detail datasets obtained from portable devices. For validating this proposal for improved COVID-19 screening, several experiments were conducted. The results demonstrate that this data augmentation strategy improves the performance of a previous COVID-19 screening proposal, achieving an accuracy of 98.61% when distinguishing among NON-COVID-19 (i.e. normal control samples and samples with pathologies others than COVID-19) and genuine COVID-19 samples. It is remarkable that this methodology can be extrapolated to other pulmonary pathologies and even other medical imaging domains to overcome the data scarcity. The Author(s). Published by Elsevier Ltd. 2021-12-15 2021-07-31 /pmc/articles/PMC8325379/ /pubmed/34366577 http://dx.doi.org/10.1016/j.eswa.2021.115681 Text en © 2021 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Morís, Daniel Iglesias
de Moura Ramos, José Joaquim
Buján, Jorge Novo
Hortas, Marcos Ortega
Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title_full Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title_fullStr Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title_full_unstemmed Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title_short Data augmentation approaches using cycle-consistent adversarial networks for improving COVID-19 screening in portable chest X-ray images
title_sort data augmentation approaches using cycle-consistent adversarial networks for improving covid-19 screening in portable chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325379/
https://www.ncbi.nlm.nih.gov/pubmed/34366577
http://dx.doi.org/10.1016/j.eswa.2021.115681
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