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Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network

BACKGROUND: The recent emergence of a highly infectious and contagious respiratory viral disease known as COVID-19 has vastly impacted human lives and overloaded the health care system. Therefore, it is crucial to develop a fast and accurate diagnostic system for the timely identification of COVID-1...

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Autores principales: Khan, Saddam Hussain, Sohail, Anabia, Zafar, Muhammad Mohsin, Khan, Asifullah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325950/
https://www.ncbi.nlm.nih.gov/pubmed/34348186
http://dx.doi.org/10.1016/j.pdpdt.2021.102473
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author Khan, Saddam Hussain
Sohail, Anabia
Zafar, Muhammad Mohsin
Khan, Asifullah
author_facet Khan, Saddam Hussain
Sohail, Anabia
Zafar, Muhammad Mohsin
Khan, Asifullah
author_sort Khan, Saddam Hussain
collection PubMed
description BACKGROUND: The recent emergence of a highly infectious and contagious respiratory viral disease known as COVID-19 has vastly impacted human lives and overloaded the health care system. Therefore, it is crucial to develop a fast and accurate diagnostic system for the timely identification of COVID-19 infected patients and thus to help control its spread. METHODS: This work proposes a new deep CNN based technique for COVID-19 classification in X-ray images. In this regard, two novel custom CNN architectures, namely COVID-RENet-1 and COVID-RENet-2, are developed for COVID-19 specific pneumonia analysis. The proposed technique systematically employs Region and Edge-based operations along with convolution operations. The advantage of the proposed idea is validated by performing series of experimentation and comparing results with two baseline CNNs that exploited either a single type of pooling operation or strided convolution down the architecture. Additionally, the discrimination capacity of the proposed technique is assessed by benchmarking it against the state-of-the-art CNNs on radiologist's authenticated chest X-ray dataset. Implementation is available at https://github.com/PRLAB21/Coronavirus-Disease-Analysis-using-Chest-X-Ray-Images. RESULTS: The proposed classification technique shows good generalization as compared to existing CNNs by achieving promising MCC (0.96), F-score (0.98) and Accuracy (98%). This suggests that the idea of synergistically using Region and Edge-based operations aid in better exploiting the region homogeneity, textural variations, and region boundary-related information in an image, which helps to capture the pneumonia specific pattern. CONCLUSIONS: The encouraging results of the proposed classification technique on the test set with high sensitivity (0.98) and precision (0.98) suggest the effectiveness of the proposed technique. Thus, it suggests the potential use of the proposed technique in other X-ray imagery-based infectious disease analysis.
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spelling pubmed-83259502021-08-02 Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network Khan, Saddam Hussain Sohail, Anabia Zafar, Muhammad Mohsin Khan, Asifullah Photodiagnosis Photodyn Ther Article BACKGROUND: The recent emergence of a highly infectious and contagious respiratory viral disease known as COVID-19 has vastly impacted human lives and overloaded the health care system. Therefore, it is crucial to develop a fast and accurate diagnostic system for the timely identification of COVID-19 infected patients and thus to help control its spread. METHODS: This work proposes a new deep CNN based technique for COVID-19 classification in X-ray images. In this regard, two novel custom CNN architectures, namely COVID-RENet-1 and COVID-RENet-2, are developed for COVID-19 specific pneumonia analysis. The proposed technique systematically employs Region and Edge-based operations along with convolution operations. The advantage of the proposed idea is validated by performing series of experimentation and comparing results with two baseline CNNs that exploited either a single type of pooling operation or strided convolution down the architecture. Additionally, the discrimination capacity of the proposed technique is assessed by benchmarking it against the state-of-the-art CNNs on radiologist's authenticated chest X-ray dataset. Implementation is available at https://github.com/PRLAB21/Coronavirus-Disease-Analysis-using-Chest-X-Ray-Images. RESULTS: The proposed classification technique shows good generalization as compared to existing CNNs by achieving promising MCC (0.96), F-score (0.98) and Accuracy (98%). This suggests that the idea of synergistically using Region and Edge-based operations aid in better exploiting the region homogeneity, textural variations, and region boundary-related information in an image, which helps to capture the pneumonia specific pattern. CONCLUSIONS: The encouraging results of the proposed classification technique on the test set with high sensitivity (0.98) and precision (0.98) suggest the effectiveness of the proposed technique. Thus, it suggests the potential use of the proposed technique in other X-ray imagery-based infectious disease analysis. Elsevier B.V. 2021-09 2021-08-01 /pmc/articles/PMC8325950/ /pubmed/34348186 http://dx.doi.org/10.1016/j.pdpdt.2021.102473 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Khan, Saddam Hussain
Sohail, Anabia
Zafar, Muhammad Mohsin
Khan, Asifullah
Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title_full Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title_fullStr Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title_full_unstemmed Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title_short Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network
title_sort coronavirus disease analysis using chest x-ray images and a novel deep convolutional neural network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325950/
https://www.ncbi.nlm.nih.gov/pubmed/34348186
http://dx.doi.org/10.1016/j.pdpdt.2021.102473
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