Buffering updates enables efficient dynamic de Bruijn graphs

MOTIVATION: The de Bruijn graph has become a ubiquitous graph model for biological data ever since its initial introduction in the late 1990s. It has been used for a variety of purposes including genome assembly (Zerbino and Birney, 2008; Bankevich et al., 2012; Peng et al., 2012), variant detection...

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Detalles Bibliográficos
Autores principales: Alanko, Jarno, Alipanahi, Bahar, Settle, Jonathen, Boucher, Christina, Gagie, Travis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8326735/
https://www.ncbi.nlm.nih.gov/pubmed/34377371
http://dx.doi.org/10.1016/j.csbj.2021.06.047

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8326735/
https://www.ncbi.nlm.nih.gov/pubmed/34377371
http://dx.doi.org/10.1016/j.csbj.2021.06.047

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