Cargando…

Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis

An erythrocytosis is present when the red blood cell mass is increased, demonstrated as elevated hemoglobin and hematocrit in the laboratory evaluation. Congenital predispositions for erythrocytosis are rare, with germline variants in several genes involved in oxygen sensing (VHL, EGLN1, and EPAS1),...

Descripción completa

Detalles Bibliográficos
Autores principales: Kristan, Aleša, Pajič, Tadej, Maver, Aleš, Režen, Tadeja, Kunej, Tanja, Količ, Rok, Vuga, Andrej, Fink, Martina, Žula, Špela, Podgornik, Helena, Anžej Doma, Saša, Preložnik Zupan, Irena, Rozman, Damjana, Debeljak, Nataša
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327209/
https://www.ncbi.nlm.nih.gov/pubmed/34349782
http://dx.doi.org/10.3389/fgene.2021.689868
_version_ 1783732023232299008
author Kristan, Aleša
Pajič, Tadej
Maver, Aleš
Režen, Tadeja
Kunej, Tanja
Količ, Rok
Vuga, Andrej
Fink, Martina
Žula, Špela
Podgornik, Helena
Anžej Doma, Saša
Preložnik Zupan, Irena
Rozman, Damjana
Debeljak, Nataša
author_facet Kristan, Aleša
Pajič, Tadej
Maver, Aleš
Režen, Tadeja
Kunej, Tanja
Količ, Rok
Vuga, Andrej
Fink, Martina
Žula, Špela
Podgornik, Helena
Anžej Doma, Saša
Preložnik Zupan, Irena
Rozman, Damjana
Debeljak, Nataša
author_sort Kristan, Aleša
collection PubMed
description An erythrocytosis is present when the red blood cell mass is increased, demonstrated as elevated hemoglobin and hematocrit in the laboratory evaluation. Congenital predispositions for erythrocytosis are rare, with germline variants in several genes involved in oxygen sensing (VHL, EGLN1, and EPAS1), signaling for hematopoietic cell maturation (EPOR and EPO), and oxygen transfer (HBB, HBA1, HBA2, and BPGM) that were already associated with the eight congenital types (ECYT1–8). Screening for variants in known congenital erythrocytosis genes with classical sequencing approach gives a correct diagnosis for only up to one-third of the patients. The genetic background of erythrocytosis is more heterogeneous, and additional genes involved in erythropoiesis and iron metabolism could have a putative effect on the development of erythrocytosis. This study aimed to detect variants in patients with yet unexplained erythrocytosis using the next-generation sequencing (NGS) approach, targeting genes associated with erythrocytosis and increased iron uptake and implementing the diagnostics of congenital erythrocytosis in Slovenia. Selected 25 patients with high hemoglobin, high hematocrit, and no acquired causes were screened for variants in the 39 candidate genes. We identified one pathogenic variant in EPAS1 gene and three novel variants with yet unknown significance in genes EPAS1, JAK2, and SH2B3. Interestingly, a high proportion of patients were heterozygous carriers for two variants in HFE gene, otherwise pathogenic for the condition of iron overload. The association between the HFE variants and the development of erythrocytosis is not clearly understood. With a targeted NGS approach, we determined an actual genetic cause for the erythrocytosis in one patient and contributed to better management of the disease for the patient and his family. The effect of variants of unknown significance on the enhanced production of red blood cells needs to be further explored with functional analysis. This study is of great significance for the improvement of diagnosis of Slovenian patients with unexplained erythrocytosis and future research on the etiology of this rare hematological disorder.
format Online
Article
Text
id pubmed-8327209
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-83272092021-08-03 Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis Kristan, Aleša Pajič, Tadej Maver, Aleš Režen, Tadeja Kunej, Tanja Količ, Rok Vuga, Andrej Fink, Martina Žula, Špela Podgornik, Helena Anžej Doma, Saša Preložnik Zupan, Irena Rozman, Damjana Debeljak, Nataša Front Genet Genetics An erythrocytosis is present when the red blood cell mass is increased, demonstrated as elevated hemoglobin and hematocrit in the laboratory evaluation. Congenital predispositions for erythrocytosis are rare, with germline variants in several genes involved in oxygen sensing (VHL, EGLN1, and EPAS1), signaling for hematopoietic cell maturation (EPOR and EPO), and oxygen transfer (HBB, HBA1, HBA2, and BPGM) that were already associated with the eight congenital types (ECYT1–8). Screening for variants in known congenital erythrocytosis genes with classical sequencing approach gives a correct diagnosis for only up to one-third of the patients. The genetic background of erythrocytosis is more heterogeneous, and additional genes involved in erythropoiesis and iron metabolism could have a putative effect on the development of erythrocytosis. This study aimed to detect variants in patients with yet unexplained erythrocytosis using the next-generation sequencing (NGS) approach, targeting genes associated with erythrocytosis and increased iron uptake and implementing the diagnostics of congenital erythrocytosis in Slovenia. Selected 25 patients with high hemoglobin, high hematocrit, and no acquired causes were screened for variants in the 39 candidate genes. We identified one pathogenic variant in EPAS1 gene and three novel variants with yet unknown significance in genes EPAS1, JAK2, and SH2B3. Interestingly, a high proportion of patients were heterozygous carriers for two variants in HFE gene, otherwise pathogenic for the condition of iron overload. The association between the HFE variants and the development of erythrocytosis is not clearly understood. With a targeted NGS approach, we determined an actual genetic cause for the erythrocytosis in one patient and contributed to better management of the disease for the patient and his family. The effect of variants of unknown significance on the enhanced production of red blood cells needs to be further explored with functional analysis. This study is of great significance for the improvement of diagnosis of Slovenian patients with unexplained erythrocytosis and future research on the etiology of this rare hematological disorder. Frontiers Media S.A. 2021-07-19 /pmc/articles/PMC8327209/ /pubmed/34349782 http://dx.doi.org/10.3389/fgene.2021.689868 Text en Copyright © 2021 Kristan, Pajič, Maver, Režen, Kunej, Količ, Vuga, Fink, Žula, Podgornik, Anžej Doma, Preložnik Zupan, Rozman and Debeljak. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Kristan, Aleša
Pajič, Tadej
Maver, Aleš
Režen, Tadeja
Kunej, Tanja
Količ, Rok
Vuga, Andrej
Fink, Martina
Žula, Špela
Podgornik, Helena
Anžej Doma, Saša
Preložnik Zupan, Irena
Rozman, Damjana
Debeljak, Nataša
Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title_full Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title_fullStr Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title_full_unstemmed Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title_short Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis
title_sort identification of variants associated with rare hematological disorder erythrocytosis using targeted next-generation sequencing analysis
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327209/
https://www.ncbi.nlm.nih.gov/pubmed/34349782
http://dx.doi.org/10.3389/fgene.2021.689868
work_keys_str_mv AT kristanalesa identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT pajictadej identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT maverales identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT rezentadeja identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT kunejtanja identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT kolicrok identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT vugaandrej identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT finkmartina identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT zulaspela identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT podgornikhelena identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT anzejdomasasa identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT preloznikzupanirena identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT rozmandamjana identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis
AT debeljaknatasa identificationofvariantsassociatedwithrarehematologicaldisordererythrocytosisusingtargetednextgenerationsequencinganalysis