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Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex
Russula albonigra is considered a well-known species, morphologically delimited by the context of the basidiomata blackening without intermediate reddening, and the menthol-cooling taste of the lamellae. It is supposed to have a broad ecological range and a large distribution area. A thorough molecu...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327428/ https://www.ncbi.nlm.nih.gov/pubmed/34334127 http://dx.doi.org/10.1186/s43008-021-00064-0 |
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author | De Lange, Ruben Adamčík, Slavomír Adamčíkova, Katarína Asselman, Pieter Borovička, Jan Delgat, Lynn Hampe, Felix Verbeken, Annemieke |
author_facet | De Lange, Ruben Adamčík, Slavomír Adamčíkova, Katarína Asselman, Pieter Borovička, Jan Delgat, Lynn Hampe, Felix Verbeken, Annemieke |
author_sort | De Lange, Ruben |
collection | PubMed |
description | Russula albonigra is considered a well-known species, morphologically delimited by the context of the basidiomata blackening without intermediate reddening, and the menthol-cooling taste of the lamellae. It is supposed to have a broad ecological range and a large distribution area. A thorough molecular analysis based on four nuclear markers (ITS, LSU, RPB2 and TEF1-α) shows this traditional concept of R. albonigra s. lat. represents a species complex consisting of at least five European, three North American, and one Chinese species. Morphological study shows traditional characters used to delimit R. albonigra are not always reliable. Therefore, a new delimitation of the R. albonigra complex is proposed and a key to the described European species of R. subgen. Compactae is presented. A lectotype and an epitype are designated for R. albonigra and three new European species are described: R. ambusta, R. nigrifacta, and R. ustulata. Different thresholds of UNITE species hypotheses were tested against the taxonomic data. The distance threshold of 0.5% gives a perfect match to the phylogenetically defined species within the R. albonigra complex. Publicly available sequence data can contribute to species delimitation and increase our knowledge on ecology and distribution, but the pitfalls are short and low quality sequences. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s43008-021-00064-0. |
format | Online Article Text |
id | pubmed-8327428 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-83274282021-08-13 Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex De Lange, Ruben Adamčík, Slavomír Adamčíkova, Katarína Asselman, Pieter Borovička, Jan Delgat, Lynn Hampe, Felix Verbeken, Annemieke IMA Fungus Research Russula albonigra is considered a well-known species, morphologically delimited by the context of the basidiomata blackening without intermediate reddening, and the menthol-cooling taste of the lamellae. It is supposed to have a broad ecological range and a large distribution area. A thorough molecular analysis based on four nuclear markers (ITS, LSU, RPB2 and TEF1-α) shows this traditional concept of R. albonigra s. lat. represents a species complex consisting of at least five European, three North American, and one Chinese species. Morphological study shows traditional characters used to delimit R. albonigra are not always reliable. Therefore, a new delimitation of the R. albonigra complex is proposed and a key to the described European species of R. subgen. Compactae is presented. A lectotype and an epitype are designated for R. albonigra and three new European species are described: R. ambusta, R. nigrifacta, and R. ustulata. Different thresholds of UNITE species hypotheses were tested against the taxonomic data. The distance threshold of 0.5% gives a perfect match to the phylogenetically defined species within the R. albonigra complex. Publicly available sequence data can contribute to species delimitation and increase our knowledge on ecology and distribution, but the pitfalls are short and low quality sequences. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s43008-021-00064-0. BioMed Central 2021-08-02 /pmc/articles/PMC8327428/ /pubmed/34334127 http://dx.doi.org/10.1186/s43008-021-00064-0 Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research De Lange, Ruben Adamčík, Slavomír Adamčíkova, Katarína Asselman, Pieter Borovička, Jan Delgat, Lynn Hampe, Felix Verbeken, Annemieke Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title | Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title_full | Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title_fullStr | Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title_full_unstemmed | Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title_short | Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex |
title_sort | enlightening the black and white: species delimitation and unite species hypothesis testing in the russula albonigra species complex |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327428/ https://www.ncbi.nlm.nih.gov/pubmed/34334127 http://dx.doi.org/10.1186/s43008-021-00064-0 |
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