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Upregulated NLGN1 predicts poor survival in colorectal cancer
BACKGROUND: Neuroligin1 (NLGN1) is a main component of excitatory glutamatergic synapses complex and is important for synapse assembly and function. The clinical value of NLGN1 in colorectal cancer (CRC) is not clear. METHODS: We obtained the expression data of 1143 CRC patients from 3 independent G...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327451/ https://www.ncbi.nlm.nih.gov/pubmed/34340665 http://dx.doi.org/10.1186/s12885-021-08621-x |
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author | Yu, Qian Wang, Xiaojie Yang, Yinghong Chi, Pan Huang, Jianping Qiu, Shengliang Zheng, Xin Chen, Xiaowen |
author_facet | Yu, Qian Wang, Xiaojie Yang, Yinghong Chi, Pan Huang, Jianping Qiu, Shengliang Zheng, Xin Chen, Xiaowen |
author_sort | Yu, Qian |
collection | PubMed |
description | BACKGROUND: Neuroligin1 (NLGN1) is a main component of excitatory glutamatergic synapses complex and is important for synapse assembly and function. The clinical value of NLGN1 in colorectal cancer (CRC) is not clear. METHODS: We obtained the expression data of 1143 CRC patients from 3 independent Gene Expression Omnibus (GEO) datasets (GSE32323, GSE24551, GSE39582) and The Cancer Genome Atlas (TCGA) to make the comparison of the NLGN1 expression level between CRC tissues and matched noncancerous tissues, and to evaluate its value in predicting survival of CRC patients. At the protein level, these results were further confirmed by immunohistochemical staining of 52 CRC samples in our own centre. Finally, the function of NLGN1 was explored by gene set enrichment analysis (GSEA). RESULTS: Increased mRNA and protein levels of NLGN1 expression were associated with worse overall survival or recurrence-free survival in CRC patients from 2 GEO datasets, the TCGA database, and our cohort. In addition, multivariate regression analysis showed that NLGN1 was an independent poor prognostic factor of survival in patients with CRC in TCGA database (OR = 2.524, P = 0.010). Functional analysis revealed that NLGN1 was correlated with function involving the Hedgehog signaling pathway, mismatch repair process, and some material metabolism processes. CONCLUSIONS: This study is the first to implicate and verify NLGN1 as a new poor prognostic marker for CRC. |
format | Online Article Text |
id | pubmed-8327451 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-83274512021-08-03 Upregulated NLGN1 predicts poor survival in colorectal cancer Yu, Qian Wang, Xiaojie Yang, Yinghong Chi, Pan Huang, Jianping Qiu, Shengliang Zheng, Xin Chen, Xiaowen BMC Cancer Research BACKGROUND: Neuroligin1 (NLGN1) is a main component of excitatory glutamatergic synapses complex and is important for synapse assembly and function. The clinical value of NLGN1 in colorectal cancer (CRC) is not clear. METHODS: We obtained the expression data of 1143 CRC patients from 3 independent Gene Expression Omnibus (GEO) datasets (GSE32323, GSE24551, GSE39582) and The Cancer Genome Atlas (TCGA) to make the comparison of the NLGN1 expression level between CRC tissues and matched noncancerous tissues, and to evaluate its value in predicting survival of CRC patients. At the protein level, these results were further confirmed by immunohistochemical staining of 52 CRC samples in our own centre. Finally, the function of NLGN1 was explored by gene set enrichment analysis (GSEA). RESULTS: Increased mRNA and protein levels of NLGN1 expression were associated with worse overall survival or recurrence-free survival in CRC patients from 2 GEO datasets, the TCGA database, and our cohort. In addition, multivariate regression analysis showed that NLGN1 was an independent poor prognostic factor of survival in patients with CRC in TCGA database (OR = 2.524, P = 0.010). Functional analysis revealed that NLGN1 was correlated with function involving the Hedgehog signaling pathway, mismatch repair process, and some material metabolism processes. CONCLUSIONS: This study is the first to implicate and verify NLGN1 as a new poor prognostic marker for CRC. BioMed Central 2021-08-02 /pmc/articles/PMC8327451/ /pubmed/34340665 http://dx.doi.org/10.1186/s12885-021-08621-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yu, Qian Wang, Xiaojie Yang, Yinghong Chi, Pan Huang, Jianping Qiu, Shengliang Zheng, Xin Chen, Xiaowen Upregulated NLGN1 predicts poor survival in colorectal cancer |
title | Upregulated NLGN1 predicts poor survival in colorectal cancer |
title_full | Upregulated NLGN1 predicts poor survival in colorectal cancer |
title_fullStr | Upregulated NLGN1 predicts poor survival in colorectal cancer |
title_full_unstemmed | Upregulated NLGN1 predicts poor survival in colorectal cancer |
title_short | Upregulated NLGN1 predicts poor survival in colorectal cancer |
title_sort | upregulated nlgn1 predicts poor survival in colorectal cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8327451/ https://www.ncbi.nlm.nih.gov/pubmed/34340665 http://dx.doi.org/10.1186/s12885-021-08621-x |
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