The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis

Paris polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,07...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiang, Yuan, Yang, Qingshu, Wang, Jing, Qian, Jun, Duan, Baozhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330706/
https://www.ncbi.nlm.nih.gov/pubmed/34377807
http://dx.doi.org/10.1080/23802359.2021.1959450
_version_ 1783732775151468544
author Jiang, Yuan
Yang, Qingshu
Wang, Jing
Qian, Jun
Duan, Baozhong
author_facet Jiang, Yuan
Yang, Qingshu
Wang, Jing
Qian, Jun
Duan, Baozhong
author_sort Jiang, Yuan
collection PubMed
description Paris polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,079 base pairs (bp) in length with 36.96% G + C content. The cp genome is divided into (a) large single copy (LSC) (84,393 bp), (b) small single copy (SSC) (16,066 bp), and (c) two inverted regions (32,310 bp). The cp genome contains 135 genes, including 89 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicated that P. polyphylla var. alba is closest to P. polyphylla var. emeiensis, and Paris had a close relationship with Trillium in Melanthiaceae.
format Online
Article
Text
id pubmed-8330706
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-83307062021-08-09 The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis Jiang, Yuan Yang, Qingshu Wang, Jing Qian, Jun Duan, Baozhong Mitochondrial DNA B Resour Mitogenome Announcement Paris polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,079 base pairs (bp) in length with 36.96% G + C content. The cp genome is divided into (a) large single copy (LSC) (84,393 bp), (b) small single copy (SSC) (16,066 bp), and (c) two inverted regions (32,310 bp). The cp genome contains 135 genes, including 89 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicated that P. polyphylla var. alba is closest to P. polyphylla var. emeiensis, and Paris had a close relationship with Trillium in Melanthiaceae. Taylor & Francis 2021-07-27 /pmc/articles/PMC8330706/ /pubmed/34377807 http://dx.doi.org/10.1080/23802359.2021.1959450 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jiang, Yuan
Yang, Qingshu
Wang, Jing
Qian, Jun
Duan, Baozhong
The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title_full The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title_fullStr The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title_full_unstemmed The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title_short The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
title_sort complete chloroplast genome sequence of paris polyphylla var. alba h.li & r.j.mitchell and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330706/
https://www.ncbi.nlm.nih.gov/pubmed/34377807
http://dx.doi.org/10.1080/23802359.2021.1959450
work_keys_str_mv AT jiangyuan thecompletechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT yangqingshu thecompletechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT wangjing thecompletechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT qianjun thecompletechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT duanbaozhong thecompletechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT jiangyuan completechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT yangqingshu completechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT wangjing completechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT qianjun completechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis
AT duanbaozhong completechloroplastgenomesequenceofparispolyphyllavaralbahlirjmitchellanditsphylogeneticanalysis

Ejemplares similares