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The complete chloroplast genome of Agrostis capillaris L
Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and compos...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330763/ https://www.ncbi.nlm.nih.gov/pubmed/34377817 http://dx.doi.org/10.1080/23802359.2021.1959446 |
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author | He, Hongyan Fu, Jiayi Wang, Qianqian Xi, Qianqian Wei, Xiangyu Zhao, Yi Ling, Chen Chang, Tianliang Zhao, Yuwei |
author_facet | He, Hongyan Fu, Jiayi Wang, Qianqian Xi, Qianqian Wei, Xiangyu Zhao, Yi Ling, Chen Chang, Tianliang Zhao, Yuwei |
author_sort | He, Hongyan |
collection | PubMed |
description | Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and composed of 136,396 bp nucleotides with a GC content of about 38.5%. There were a large single-copy region (LSC, 81,659bp), a small single-copy region (SSC, 12,593bp), and a pair of reverse repeat regions (IRs, 42,144bp) in the chloroplast genome. In total, the A. capillaris chloroplast genome contained 144 genes, including 96 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that A. capillaris was closely related to A. gigantean. The sequence data of A. capillaris chloroplast genome could provide useful genetic information for the studies on phylogenetic and evolutionary of Agrostidinae. |
format | Online Article Text |
id | pubmed-8330763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-83307632021-08-09 The complete chloroplast genome of Agrostis capillaris L He, Hongyan Fu, Jiayi Wang, Qianqian Xi, Qianqian Wei, Xiangyu Zhao, Yi Ling, Chen Chang, Tianliang Zhao, Yuwei Mitochondrial DNA B Resour Mitogenome Announcement Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and composed of 136,396 bp nucleotides with a GC content of about 38.5%. There were a large single-copy region (LSC, 81,659bp), a small single-copy region (SSC, 12,593bp), and a pair of reverse repeat regions (IRs, 42,144bp) in the chloroplast genome. In total, the A. capillaris chloroplast genome contained 144 genes, including 96 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that A. capillaris was closely related to A. gigantean. The sequence data of A. capillaris chloroplast genome could provide useful genetic information for the studies on phylogenetic and evolutionary of Agrostidinae. Taylor & Francis 2021-07-28 /pmc/articles/PMC8330763/ /pubmed/34377817 http://dx.doi.org/10.1080/23802359.2021.1959446 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement He, Hongyan Fu, Jiayi Wang, Qianqian Xi, Qianqian Wei, Xiangyu Zhao, Yi Ling, Chen Chang, Tianliang Zhao, Yuwei The complete chloroplast genome of Agrostis capillaris L |
title | The complete chloroplast genome of Agrostis capillaris L |
title_full | The complete chloroplast genome of Agrostis capillaris L |
title_fullStr | The complete chloroplast genome of Agrostis capillaris L |
title_full_unstemmed | The complete chloroplast genome of Agrostis capillaris L |
title_short | The complete chloroplast genome of Agrostis capillaris L |
title_sort | complete chloroplast genome of agrostis capillaris l |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330763/ https://www.ncbi.nlm.nih.gov/pubmed/34377817 http://dx.doi.org/10.1080/23802359.2021.1959446 |
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