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The complete chloroplast genome of Agrostis capillaris L

Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and compos...

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Autores principales: He, Hongyan, Fu, Jiayi, Wang, Qianqian, Xi, Qianqian, Wei, Xiangyu, Zhao, Yi, Ling, Chen, Chang, Tianliang, Zhao, Yuwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330763/
https://www.ncbi.nlm.nih.gov/pubmed/34377817
http://dx.doi.org/10.1080/23802359.2021.1959446
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author He, Hongyan
Fu, Jiayi
Wang, Qianqian
Xi, Qianqian
Wei, Xiangyu
Zhao, Yi
Ling, Chen
Chang, Tianliang
Zhao, Yuwei
author_facet He, Hongyan
Fu, Jiayi
Wang, Qianqian
Xi, Qianqian
Wei, Xiangyu
Zhao, Yi
Ling, Chen
Chang, Tianliang
Zhao, Yuwei
author_sort He, Hongyan
collection PubMed
description Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and composed of 136,396 bp nucleotides with a GC content of about 38.5%. There were a large single-copy region (LSC, 81,659bp), a small single-copy region (SSC, 12,593bp), and a pair of reverse repeat regions (IRs, 42,144bp) in the chloroplast genome. In total, the A. capillaris chloroplast genome contained 144 genes, including 96 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that A. capillaris was closely related to A. gigantean. The sequence data of A. capillaris chloroplast genome could provide useful genetic information for the studies on phylogenetic and evolutionary of Agrostidinae.
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spelling pubmed-83307632021-08-09 The complete chloroplast genome of Agrostis capillaris L He, Hongyan Fu, Jiayi Wang, Qianqian Xi, Qianqian Wei, Xiangyu Zhao, Yi Ling, Chen Chang, Tianliang Zhao, Yuwei Mitochondrial DNA B Resour Mitogenome Announcement Agrostis capillaris is a cool-season turf grass species that is found worldwide in temperate countries, and a good Pb phytostabilizer. In this study, the entire chloroplast genome sequence of A. capillaris was determined by Illumina sequencing. The complete chloroplast genome was circular and composed of 136,396 bp nucleotides with a GC content of about 38.5%. There were a large single-copy region (LSC, 81,659bp), a small single-copy region (SSC, 12,593bp), and a pair of reverse repeat regions (IRs, 42,144bp) in the chloroplast genome. In total, the A. capillaris chloroplast genome contained 144 genes, including 96 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that A. capillaris was closely related to A. gigantean. The sequence data of A. capillaris chloroplast genome could provide useful genetic information for the studies on phylogenetic and evolutionary of Agrostidinae. Taylor & Francis 2021-07-28 /pmc/articles/PMC8330763/ /pubmed/34377817 http://dx.doi.org/10.1080/23802359.2021.1959446 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
He, Hongyan
Fu, Jiayi
Wang, Qianqian
Xi, Qianqian
Wei, Xiangyu
Zhao, Yi
Ling, Chen
Chang, Tianliang
Zhao, Yuwei
The complete chloroplast genome of Agrostis capillaris L
title The complete chloroplast genome of Agrostis capillaris L
title_full The complete chloroplast genome of Agrostis capillaris L
title_fullStr The complete chloroplast genome of Agrostis capillaris L
title_full_unstemmed The complete chloroplast genome of Agrostis capillaris L
title_short The complete chloroplast genome of Agrostis capillaris L
title_sort complete chloroplast genome of agrostis capillaris l
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330763/
https://www.ncbi.nlm.nih.gov/pubmed/34377817
http://dx.doi.org/10.1080/23802359.2021.1959446
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