The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)

Epimedium flavum Stearn, which belongs to Berberidaceae, is mainly distributed in the Sichuan province of China. In this study, the complete chloroplast genome of E. flavum was reported for the first time. The whole genome of E. flavum was 159,134 bp in length, and revealed a typical quadripartite s...

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Autores principales: Luo, Hui, Liang, Qiong, Huang, Ruoqi, Dong, Jingzhou, Zhang, Yanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330771/
https://www.ncbi.nlm.nih.gov/pubmed/34377801
http://dx.doi.org/10.1080/23802359.2021.1920500
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author Luo, Hui
Liang, Qiong
Huang, Ruoqi
Dong, Jingzhou
Zhang, Yanjun
author_facet Luo, Hui
Liang, Qiong
Huang, Ruoqi
Dong, Jingzhou
Zhang, Yanjun
author_sort Luo, Hui
collection PubMed
description Epimedium flavum Stearn, which belongs to Berberidaceae, is mainly distributed in the Sichuan province of China. In this study, the complete chloroplast genome of E. flavum was reported for the first time. The whole genome of E. flavum was 159,134 bp in length, and revealed a typical quadripartite structure, including two copies of an inverted repeat (IR) region of 27,735 bp separating a large single-copy region (LSC, 86,576 bp) and a small single-copy region (SSC, 17, 088 bp). The chloroplast genome contained 112 unique genes, including 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis showed that E. flavum of series Davidianae was firstly clustered with E. brevicornu of ser. Brachyerae.
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spelling pubmed-83307712021-08-09 The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae) Luo, Hui Liang, Qiong Huang, Ruoqi Dong, Jingzhou Zhang, Yanjun Mitochondrial DNA B Resour Mitogenome Announcement Epimedium flavum Stearn, which belongs to Berberidaceae, is mainly distributed in the Sichuan province of China. In this study, the complete chloroplast genome of E. flavum was reported for the first time. The whole genome of E. flavum was 159,134 bp in length, and revealed a typical quadripartite structure, including two copies of an inverted repeat (IR) region of 27,735 bp separating a large single-copy region (LSC, 86,576 bp) and a small single-copy region (SSC, 17, 088 bp). The chloroplast genome contained 112 unique genes, including 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis showed that E. flavum of series Davidianae was firstly clustered with E. brevicornu of ser. Brachyerae. Taylor & Francis 2021-07-27 /pmc/articles/PMC8330771/ /pubmed/34377801 http://dx.doi.org/10.1080/23802359.2021.1920500 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Luo, Hui
Liang, Qiong
Huang, Ruoqi
Dong, Jingzhou
Zhang, Yanjun
The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title_full The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title_fullStr The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title_full_unstemmed The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title_short The complete chloroplast genome of Epimedium flavum Stearn (Berberidaceae)
title_sort complete chloroplast genome of epimedium flavum stearn (berberidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330771/
https://www.ncbi.nlm.nih.gov/pubmed/34377801
http://dx.doi.org/10.1080/23802359.2021.1920500
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