Cargando…
The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China
The complete chloroplast genome of Salix cupularis Rehder was assembled and subjected to phylogenetic analysis. The chloroplast genome of S. cupularis was 155,518 bp in length, containing a large single-copy region (84,373 bp), a small single-copy region (16,226 bp), and two inverted repeat regions...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330782/ https://www.ncbi.nlm.nih.gov/pubmed/34377814 http://dx.doi.org/10.1080/23802359.2021.1959435 |
_version_ | 1783732792862965760 |
---|---|
author | Li, Jiayong Zhuo, Zhihang Xu, Danping Yang, Hongjun Zhu, Tianhui |
author_facet | Li, Jiayong Zhuo, Zhihang Xu, Danping Yang, Hongjun Zhu, Tianhui |
author_sort | Li, Jiayong |
collection | PubMed |
description | The complete chloroplast genome of Salix cupularis Rehder was assembled and subjected to phylogenetic analysis. The chloroplast genome of S. cupularis was 155,518 bp in length, containing a large single-copy region (84,373 bp), a small single-copy region (16,226 bp), and two inverted repeat regions (27,458 bp). The overall GC content of S. cupularis chloroplast genome was 36.70%. The chloroplast genome of S. cupularis contained 127 unique genes, including 82 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that S. cupularis was most related to Salix magnifica. |
format | Online Article Text |
id | pubmed-8330782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-83307822021-08-09 The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China Li, Jiayong Zhuo, Zhihang Xu, Danping Yang, Hongjun Zhu, Tianhui Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Salix cupularis Rehder was assembled and subjected to phylogenetic analysis. The chloroplast genome of S. cupularis was 155,518 bp in length, containing a large single-copy region (84,373 bp), a small single-copy region (16,226 bp), and two inverted repeat regions (27,458 bp). The overall GC content of S. cupularis chloroplast genome was 36.70%. The chloroplast genome of S. cupularis contained 127 unique genes, including 82 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that S. cupularis was most related to Salix magnifica. Taylor & Francis 2021-07-28 /pmc/articles/PMC8330782/ /pubmed/34377814 http://dx.doi.org/10.1080/23802359.2021.1959435 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Jiayong Zhuo, Zhihang Xu, Danping Yang, Hongjun Zhu, Tianhui The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title | The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title_full | The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title_fullStr | The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title_full_unstemmed | The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title_short | The complete chloroplast genome of Salix cupularis Rehder, a sand binder in alpine hillslope, China |
title_sort | complete chloroplast genome of salix cupularis rehder, a sand binder in alpine hillslope, china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8330782/ https://www.ncbi.nlm.nih.gov/pubmed/34377814 http://dx.doi.org/10.1080/23802359.2021.1959435 |
work_keys_str_mv | AT lijiayong thecompletechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT zhuozhihang thecompletechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT xudanping thecompletechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT yanghongjun thecompletechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT zhutianhui thecompletechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT lijiayong completechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT zhuozhihang completechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT xudanping completechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT yanghongjun completechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina AT zhutianhui completechloroplastgenomeofsalixcupularisrehderasandbinderinalpinehillslopechina |