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Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19

There is a crucial need for quick testing and diagnosis of patients during the COVID-19 pandemic. Lung ultrasound is an imaging modality that is cost-effective, widely accessible, and can be used to diagnose acute respiratory distress syndrome in patients with COVID-19. It can be used to find import...

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Autores principales: Erfanian Ebadi, Salehe, Krishnaswamy, Deepa, Bolouri, Seyed Ehsan Seyed, Zonoobi, Dornoosh, Greiner, Russell, Meuser-Herr, Nathaniel, Jaremko, Jacob L., Kapur, Jeevesh, Noga, Michelle, Punithakumar, Kumaradevan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8332742/
https://www.ncbi.nlm.nih.gov/pubmed/34368420
http://dx.doi.org/10.1016/j.imu.2021.100687
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author Erfanian Ebadi, Salehe
Krishnaswamy, Deepa
Bolouri, Seyed Ehsan Seyed
Zonoobi, Dornoosh
Greiner, Russell
Meuser-Herr, Nathaniel
Jaremko, Jacob L.
Kapur, Jeevesh
Noga, Michelle
Punithakumar, Kumaradevan
author_facet Erfanian Ebadi, Salehe
Krishnaswamy, Deepa
Bolouri, Seyed Ehsan Seyed
Zonoobi, Dornoosh
Greiner, Russell
Meuser-Herr, Nathaniel
Jaremko, Jacob L.
Kapur, Jeevesh
Noga, Michelle
Punithakumar, Kumaradevan
author_sort Erfanian Ebadi, Salehe
collection PubMed
description There is a crucial need for quick testing and diagnosis of patients during the COVID-19 pandemic. Lung ultrasound is an imaging modality that is cost-effective, widely accessible, and can be used to diagnose acute respiratory distress syndrome in patients with COVID-19. It can be used to find important characteristics in the images, including A-lines, B-lines, consolidation, and pleural effusion, which all inform the clinician in monitoring and diagnosing the disease. With the use of portable ultrasound transducers, lung ultrasound images can be easily acquired, however, the images are often of poor quality. They often require an expert clinician interpretation, which may be time-consuming and is highly subjective. We propose a method for fast and reliable interpretation of lung ultrasound images by use of deep learning, based on the Kinetics-I3D network. Our learned model can classify an entire lung ultrasound scan obtained at point-of-care, without requiring the use of preprocessing or a frame-by-frame analysis. We compare our video classifier against ground truth classification annotations provided by a set of expert radiologists and clinicians, which include A-lines, B-lines, consolidation, and pleural effusion. Our classification method achieves an accuracy of 90% and an average precision score of 95% with the use of 5-fold cross-validation. The results indicate the potential use of automated analysis of portable lung ultrasound images to assist clinicians in screening and diagnosing patients.
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spelling pubmed-83327422021-08-04 Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19 Erfanian Ebadi, Salehe Krishnaswamy, Deepa Bolouri, Seyed Ehsan Seyed Zonoobi, Dornoosh Greiner, Russell Meuser-Herr, Nathaniel Jaremko, Jacob L. Kapur, Jeevesh Noga, Michelle Punithakumar, Kumaradevan Inform Med Unlocked Article There is a crucial need for quick testing and diagnosis of patients during the COVID-19 pandemic. Lung ultrasound is an imaging modality that is cost-effective, widely accessible, and can be used to diagnose acute respiratory distress syndrome in patients with COVID-19. It can be used to find important characteristics in the images, including A-lines, B-lines, consolidation, and pleural effusion, which all inform the clinician in monitoring and diagnosing the disease. With the use of portable ultrasound transducers, lung ultrasound images can be easily acquired, however, the images are often of poor quality. They often require an expert clinician interpretation, which may be time-consuming and is highly subjective. We propose a method for fast and reliable interpretation of lung ultrasound images by use of deep learning, based on the Kinetics-I3D network. Our learned model can classify an entire lung ultrasound scan obtained at point-of-care, without requiring the use of preprocessing or a frame-by-frame analysis. We compare our video classifier against ground truth classification annotations provided by a set of expert radiologists and clinicians, which include A-lines, B-lines, consolidation, and pleural effusion. Our classification method achieves an accuracy of 90% and an average precision score of 95% with the use of 5-fold cross-validation. The results indicate the potential use of automated analysis of portable lung ultrasound images to assist clinicians in screening and diagnosing patients. The Authors. Published by Elsevier Ltd. 2021 2021-08-04 /pmc/articles/PMC8332742/ /pubmed/34368420 http://dx.doi.org/10.1016/j.imu.2021.100687 Text en © 2021 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Erfanian Ebadi, Salehe
Krishnaswamy, Deepa
Bolouri, Seyed Ehsan Seyed
Zonoobi, Dornoosh
Greiner, Russell
Meuser-Herr, Nathaniel
Jaremko, Jacob L.
Kapur, Jeevesh
Noga, Michelle
Punithakumar, Kumaradevan
Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title_full Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title_fullStr Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title_full_unstemmed Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title_short Automated detection of pneumonia in lung ultrasound using deep video classification for COVID-19
title_sort automated detection of pneumonia in lung ultrasound using deep video classification for covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8332742/
https://www.ncbi.nlm.nih.gov/pubmed/34368420
http://dx.doi.org/10.1016/j.imu.2021.100687
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