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Clinical and biological clusters of sepsis patients using hierarchical clustering
BACKGROUND: Heterogeneity in sepsis expression is multidimensional, including highly disparate data such as the underlying disorders, infection source, causative micro-organismsand organ failures. The aim of the study is to identify clusters of patients based on clinical and biological characteristi...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8336799/ https://www.ncbi.nlm.nih.gov/pubmed/34347776 http://dx.doi.org/10.1371/journal.pone.0252793 |
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author | Papin, Grégory Bailly, Sébastien Dupuis, Claire Ruckly, Stéphane Gainnier, Marc Argaud, Laurent Azoulay, Elie Adrie, Christophe Souweine, Bertrand Goldgran-Toledano, Dany Marcotte, Guillaume Gros, Antoine Reignier, Jean Mourvillier, Bruno Forel, Jean-Marie Sonneville, Romain Dumenil, Anne-Sylvie Darmon, Michael Garrouste-Orgeas, Maité Schwebel, Carole Timsit, Jean-François |
author_facet | Papin, Grégory Bailly, Sébastien Dupuis, Claire Ruckly, Stéphane Gainnier, Marc Argaud, Laurent Azoulay, Elie Adrie, Christophe Souweine, Bertrand Goldgran-Toledano, Dany Marcotte, Guillaume Gros, Antoine Reignier, Jean Mourvillier, Bruno Forel, Jean-Marie Sonneville, Romain Dumenil, Anne-Sylvie Darmon, Michael Garrouste-Orgeas, Maité Schwebel, Carole Timsit, Jean-François |
author_sort | Papin, Grégory |
collection | PubMed |
description | BACKGROUND: Heterogeneity in sepsis expression is multidimensional, including highly disparate data such as the underlying disorders, infection source, causative micro-organismsand organ failures. The aim of the study is to identify clusters of patients based on clinical and biological characteristic available at patients’ admission. METHODS: All patients included in a national prospective multicenter ICU cohort OUTCOMEREA and admitted for sepsis or septic shock (Sepsis 3.0 definition) were retrospectively analyzed. A hierarchical clustering was performed in a training set of patients to build clusters based on a comprehensive set of clinical and biological characteristics available at ICU admission. Clusters were described, and the 28-day, 90-day, and one-year mortality were compared with log-rank rates. Risks of mortality were also compared after adjustment on SOFA score and year of ICU admission. RESULTS: Of the 6,046 patients with sepsis in the cohort, 4,050 (67%) were randomly allocated to the training set. Six distinct clusters were identified: young patients without any comorbidities, admitted in ICU for community-acquired pneumonia (n = 1,603 (40%)); young patients without any comorbidities, admitted in ICU for meningitis or encephalitis (n = 149 (4%)); elderly patients with COPD, admitted in ICU for bronchial infection with few organ failures (n = 243 (6%)); elderly patients, with several comorbidities and organ failures (n = 1,094 (27%)); patients admitted after surgery, with a nosocomial infection (n = 623 (15%)); young patients with immunosuppressive conditions (e.g., AIDS, chronic steroid therapy or hematological malignancy) (n = 338 (8%)). Clusters differed significantly in early or late mortality (p < .001), even after adjustment on severity of organ dysfunctions (SOFA) and year of ICU admission. CONCLUSIONS: Clinical and biological features commonly available at ICU admission of patients with sepsis or septic shock enabled to set up six clusters of patients, with very distinct outcomes. Considering these clusters may improve the care management and the homogeneity of patients in future studies. |
format | Online Article Text |
id | pubmed-8336799 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-83367992021-08-05 Clinical and biological clusters of sepsis patients using hierarchical clustering Papin, Grégory Bailly, Sébastien Dupuis, Claire Ruckly, Stéphane Gainnier, Marc Argaud, Laurent Azoulay, Elie Adrie, Christophe Souweine, Bertrand Goldgran-Toledano, Dany Marcotte, Guillaume Gros, Antoine Reignier, Jean Mourvillier, Bruno Forel, Jean-Marie Sonneville, Romain Dumenil, Anne-Sylvie Darmon, Michael Garrouste-Orgeas, Maité Schwebel, Carole Timsit, Jean-François PLoS One Research Article BACKGROUND: Heterogeneity in sepsis expression is multidimensional, including highly disparate data such as the underlying disorders, infection source, causative micro-organismsand organ failures. The aim of the study is to identify clusters of patients based on clinical and biological characteristic available at patients’ admission. METHODS: All patients included in a national prospective multicenter ICU cohort OUTCOMEREA and admitted for sepsis or septic shock (Sepsis 3.0 definition) were retrospectively analyzed. A hierarchical clustering was performed in a training set of patients to build clusters based on a comprehensive set of clinical and biological characteristics available at ICU admission. Clusters were described, and the 28-day, 90-day, and one-year mortality were compared with log-rank rates. Risks of mortality were also compared after adjustment on SOFA score and year of ICU admission. RESULTS: Of the 6,046 patients with sepsis in the cohort, 4,050 (67%) were randomly allocated to the training set. Six distinct clusters were identified: young patients without any comorbidities, admitted in ICU for community-acquired pneumonia (n = 1,603 (40%)); young patients without any comorbidities, admitted in ICU for meningitis or encephalitis (n = 149 (4%)); elderly patients with COPD, admitted in ICU for bronchial infection with few organ failures (n = 243 (6%)); elderly patients, with several comorbidities and organ failures (n = 1,094 (27%)); patients admitted after surgery, with a nosocomial infection (n = 623 (15%)); young patients with immunosuppressive conditions (e.g., AIDS, chronic steroid therapy or hematological malignancy) (n = 338 (8%)). Clusters differed significantly in early or late mortality (p < .001), even after adjustment on severity of organ dysfunctions (SOFA) and year of ICU admission. CONCLUSIONS: Clinical and biological features commonly available at ICU admission of patients with sepsis or septic shock enabled to set up six clusters of patients, with very distinct outcomes. Considering these clusters may improve the care management and the homogeneity of patients in future studies. Public Library of Science 2021-08-04 /pmc/articles/PMC8336799/ /pubmed/34347776 http://dx.doi.org/10.1371/journal.pone.0252793 Text en © 2021 Papin et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Papin, Grégory Bailly, Sébastien Dupuis, Claire Ruckly, Stéphane Gainnier, Marc Argaud, Laurent Azoulay, Elie Adrie, Christophe Souweine, Bertrand Goldgran-Toledano, Dany Marcotte, Guillaume Gros, Antoine Reignier, Jean Mourvillier, Bruno Forel, Jean-Marie Sonneville, Romain Dumenil, Anne-Sylvie Darmon, Michael Garrouste-Orgeas, Maité Schwebel, Carole Timsit, Jean-François Clinical and biological clusters of sepsis patients using hierarchical clustering |
title | Clinical and biological clusters of sepsis patients using hierarchical clustering |
title_full | Clinical and biological clusters of sepsis patients using hierarchical clustering |
title_fullStr | Clinical and biological clusters of sepsis patients using hierarchical clustering |
title_full_unstemmed | Clinical and biological clusters of sepsis patients using hierarchical clustering |
title_short | Clinical and biological clusters of sepsis patients using hierarchical clustering |
title_sort | clinical and biological clusters of sepsis patients using hierarchical clustering |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8336799/ https://www.ncbi.nlm.nih.gov/pubmed/34347776 http://dx.doi.org/10.1371/journal.pone.0252793 |
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