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Local clustering via approximate heat kernel PageRank with subgraph sampling
Graph clustering, a fundamental technique in network science for understanding structures in complex systems, presents inherent problems. Though studied extensively in the literature, graph clustering in large systems remains particularly challenging because massive graphs incur a prohibitively larg...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8338971/ https://www.ncbi.nlm.nih.gov/pubmed/34349197 http://dx.doi.org/10.1038/s41598-021-95250-w |
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author | Lu, Zhenqi Wahlström, Johan Nehorai, Arye |
author_facet | Lu, Zhenqi Wahlström, Johan Nehorai, Arye |
author_sort | Lu, Zhenqi |
collection | PubMed |
description | Graph clustering, a fundamental technique in network science for understanding structures in complex systems, presents inherent problems. Though studied extensively in the literature, graph clustering in large systems remains particularly challenging because massive graphs incur a prohibitively large computational load. The heat kernel PageRank provides a quantitative ranking of nodes, and a local cluster can be efficiently found by performing a sweep over the heat kernel PageRank vector. But computing an exact heat kernel PageRank vector may be expensive, and approximate algorithms are often used instead. Most approximate algorithms compute the heat kernel PageRank vector on the whole graph, and thus are dependent on global structures. In this paper, we present an algorithm for approximating the heat kernel PageRank on a local subgraph. Moreover, we show that the number of computations required by the proposed algorithm is sublinear in terms of the expected size of the local cluster of interest, and that it provides a good approximation of the heat kernel PageRank, with approximation errors bounded by a probabilistic guarantee. Numerical experiments verify that the local clustering algorithm using our approximate heat kernel PageRank achieves state-of-the-art performance. |
format | Online Article Text |
id | pubmed-8338971 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83389712021-08-05 Local clustering via approximate heat kernel PageRank with subgraph sampling Lu, Zhenqi Wahlström, Johan Nehorai, Arye Sci Rep Article Graph clustering, a fundamental technique in network science for understanding structures in complex systems, presents inherent problems. Though studied extensively in the literature, graph clustering in large systems remains particularly challenging because massive graphs incur a prohibitively large computational load. The heat kernel PageRank provides a quantitative ranking of nodes, and a local cluster can be efficiently found by performing a sweep over the heat kernel PageRank vector. But computing an exact heat kernel PageRank vector may be expensive, and approximate algorithms are often used instead. Most approximate algorithms compute the heat kernel PageRank vector on the whole graph, and thus are dependent on global structures. In this paper, we present an algorithm for approximating the heat kernel PageRank on a local subgraph. Moreover, we show that the number of computations required by the proposed algorithm is sublinear in terms of the expected size of the local cluster of interest, and that it provides a good approximation of the heat kernel PageRank, with approximation errors bounded by a probabilistic guarantee. Numerical experiments verify that the local clustering algorithm using our approximate heat kernel PageRank achieves state-of-the-art performance. Nature Publishing Group UK 2021-08-04 /pmc/articles/PMC8338971/ /pubmed/34349197 http://dx.doi.org/10.1038/s41598-021-95250-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lu, Zhenqi Wahlström, Johan Nehorai, Arye Local clustering via approximate heat kernel PageRank with subgraph sampling |
title | Local clustering via approximate heat kernel PageRank with subgraph sampling |
title_full | Local clustering via approximate heat kernel PageRank with subgraph sampling |
title_fullStr | Local clustering via approximate heat kernel PageRank with subgraph sampling |
title_full_unstemmed | Local clustering via approximate heat kernel PageRank with subgraph sampling |
title_short | Local clustering via approximate heat kernel PageRank with subgraph sampling |
title_sort | local clustering via approximate heat kernel pagerank with subgraph sampling |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8338971/ https://www.ncbi.nlm.nih.gov/pubmed/34349197 http://dx.doi.org/10.1038/s41598-021-95250-w |
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