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Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer
BACKGROUND: Distant metastasis (DM) is not common in differentiated thyroid cancer (DTC). However, it is associated with a significantly poor prognosis. Early detection of high-risk DTC patients is difficult, and the molecular mechanism is still unclear. Therefore, the present study aims to establis...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8339873/ https://www.ncbi.nlm.nih.gov/pubmed/34422965 http://dx.doi.org/10.21037/atm-21-383 |
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author | Wang, Wenlong Shen, Cong Zhao, Yunzhe Sun, Botao Bai, Ning Li, Xinying |
author_facet | Wang, Wenlong Shen, Cong Zhao, Yunzhe Sun, Botao Bai, Ning Li, Xinying |
author_sort | Wang, Wenlong |
collection | PubMed |
description | BACKGROUND: Distant metastasis (DM) is not common in differentiated thyroid cancer (DTC). However, it is associated with a significantly poor prognosis. Early detection of high-risk DTC patients is difficult, and the molecular mechanism is still unclear. Therefore, the present study aims to establish a novel predictive model based on clinicopathological parameters and DM-related gene signatures to provide guidelines for clinicians in decision making. METHODS: Weighted gene co-expression network analysis (WGCNA) was performed to discover co-expressed gene modules and hub genes associated with DM. Univariate and multivariate analyses were carried out to identify independent clinicopathological risk factors based on The Cancer Genome Atlas (TCGA) database. An integrated nomogram prediction model was established. Finally, real hub genes were validated using the GSE60542 database and various thyroid cell lines. RESULTS: The midnightblue module was most significantly positively correlated with DM (R=0.56, P=9e-06) by as per WGCNA. DLX5 (AUC: 0.769), COX6B2 (AUC: 0.764), and LYPD1 (AUC: 0.760) were determined to be the real hub genes that play a crucial role in predicting DM. Meanwhile, univariate and multivariate analyses demonstrated that T-stage (OR, 15.03; 95% CI, 1.75–319.40; and P=0.024), histologic subtype (OR, 0.17; 95% CI, 0.03–0.92; and P=0.042) were the independent predictors of DM. Subsequently, a nomogram model was constructed based on gene signatures and independent clinical risk factors exhibited good performance. Additionally, the mRNA expressions of real hub genes in the GSE60542 dataset were consistent with TCGA. CONCLUSIONS: The present study has provided a reliable model to predict DM in patients with DTC. This model is likely to serve as an individual risk assessment tool in therapeutic decision-making. |
format | Online Article Text |
id | pubmed-8339873 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-83398732021-08-20 Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer Wang, Wenlong Shen, Cong Zhao, Yunzhe Sun, Botao Bai, Ning Li, Xinying Ann Transl Med Original Article BACKGROUND: Distant metastasis (DM) is not common in differentiated thyroid cancer (DTC). However, it is associated with a significantly poor prognosis. Early detection of high-risk DTC patients is difficult, and the molecular mechanism is still unclear. Therefore, the present study aims to establish a novel predictive model based on clinicopathological parameters and DM-related gene signatures to provide guidelines for clinicians in decision making. METHODS: Weighted gene co-expression network analysis (WGCNA) was performed to discover co-expressed gene modules and hub genes associated with DM. Univariate and multivariate analyses were carried out to identify independent clinicopathological risk factors based on The Cancer Genome Atlas (TCGA) database. An integrated nomogram prediction model was established. Finally, real hub genes were validated using the GSE60542 database and various thyroid cell lines. RESULTS: The midnightblue module was most significantly positively correlated with DM (R=0.56, P=9e-06) by as per WGCNA. DLX5 (AUC: 0.769), COX6B2 (AUC: 0.764), and LYPD1 (AUC: 0.760) were determined to be the real hub genes that play a crucial role in predicting DM. Meanwhile, univariate and multivariate analyses demonstrated that T-stage (OR, 15.03; 95% CI, 1.75–319.40; and P=0.024), histologic subtype (OR, 0.17; 95% CI, 0.03–0.92; and P=0.042) were the independent predictors of DM. Subsequently, a nomogram model was constructed based on gene signatures and independent clinical risk factors exhibited good performance. Additionally, the mRNA expressions of real hub genes in the GSE60542 dataset were consistent with TCGA. CONCLUSIONS: The present study has provided a reliable model to predict DM in patients with DTC. This model is likely to serve as an individual risk assessment tool in therapeutic decision-making. AME Publishing Company 2021-07 /pmc/articles/PMC8339873/ /pubmed/34422965 http://dx.doi.org/10.21037/atm-21-383 Text en 2021 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Wang, Wenlong Shen, Cong Zhao, Yunzhe Sun, Botao Bai, Ning Li, Xinying Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title | Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title_full | Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title_fullStr | Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title_full_unstemmed | Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title_short | Identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
title_sort | identification and validation of potential novel biomarkers to predict distant metastasis in differentiated thyroid cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8339873/ https://www.ncbi.nlm.nih.gov/pubmed/34422965 http://dx.doi.org/10.21037/atm-21-383 |
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