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Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray

BACKGROUND: Recent increased use of medical images induces further burden of their interpretation for physicians. A plain X-ray is a low-cost examination that has low-dose radiation exposure and high availability, although diagnosing urolithiasis using this method is not always easy. Since the adven...

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Autores principales: Kobayashi, Masaki, Ishioka, Junichiro, Matsuoka, Yoh, Fukuda, Yuichi, Kohno, Yusuke, Kawano, Keizo, Morimoto, Shinji, Muta, Rie, Fujiwara, Motohiro, Kawamura, Naoko, Okuno, Tetsuo, Yoshida, Soichiro, Yokoyama, Minato, Suda, Rumi, Saiki, Ryota, Suzuki, Kenji, Kumazawa, Itsuo, Fujii, Yasuhisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8340490/
https://www.ncbi.nlm.nih.gov/pubmed/34353306
http://dx.doi.org/10.1186/s12894-021-00874-9
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author Kobayashi, Masaki
Ishioka, Junichiro
Matsuoka, Yoh
Fukuda, Yuichi
Kohno, Yusuke
Kawano, Keizo
Morimoto, Shinji
Muta, Rie
Fujiwara, Motohiro
Kawamura, Naoko
Okuno, Tetsuo
Yoshida, Soichiro
Yokoyama, Minato
Suda, Rumi
Saiki, Ryota
Suzuki, Kenji
Kumazawa, Itsuo
Fujii, Yasuhisa
author_facet Kobayashi, Masaki
Ishioka, Junichiro
Matsuoka, Yoh
Fukuda, Yuichi
Kohno, Yusuke
Kawano, Keizo
Morimoto, Shinji
Muta, Rie
Fujiwara, Motohiro
Kawamura, Naoko
Okuno, Tetsuo
Yoshida, Soichiro
Yokoyama, Minato
Suda, Rumi
Saiki, Ryota
Suzuki, Kenji
Kumazawa, Itsuo
Fujii, Yasuhisa
author_sort Kobayashi, Masaki
collection PubMed
description BACKGROUND: Recent increased use of medical images induces further burden of their interpretation for physicians. A plain X-ray is a low-cost examination that has low-dose radiation exposure and high availability, although diagnosing urolithiasis using this method is not always easy. Since the advent of a convolutional neural network via deep learning in the 2000s, computer-aided diagnosis (CAD) has had a great impact on automatic image analysis in the urological field. The objective of our study was to develop a CAD system with deep learning architecture to detect urinary tract stones on a plain X-ray and to evaluate the model’s accuracy. METHODS: We collected plain X-ray images of 1017 patients with a radio-opaque upper urinary tract stone. X-ray images (n = 827 and 190) were used as the training and test data, respectively. We used a 17-layer Residual Network as a convolutional neural network architecture for patch-wise training. The training data were repeatedly used until the best model accuracy was achieved within 300 runs. The F score, which is a harmonic mean of the sensitivity and positive predictive value (PPV) and represents the balance of the accuracy, was measured to evaluate the model’s accuracy. RESULTS: Using deep learning, we developed a CAD model that needed 110 ms to provide an answer for each X-ray image. The best F score was 0.752, and the sensitivity and PPV were 0.872 and 0.662, respectively. When limited to a proximal ureter stone, the sensitivity and PPV were 0.925 and 0.876, respectively, and they were the lowest at mid-ureter. CONCLUSION: CAD of a plain X-ray may be a promising method to detect radio-opaque urinary tract stones with satisfactory sensitivity although the PPV could still be improved. The CAD model detects urinary tract stones quickly and automatically and has the potential to become a helpful screening modality especially for primary care physicians for diagnosing urolithiasis. Further study using a higher volume of data would improve the diagnostic performance of CAD models to detect urinary tract stones on a plain X-ray.
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spelling pubmed-83404902021-08-06 Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray Kobayashi, Masaki Ishioka, Junichiro Matsuoka, Yoh Fukuda, Yuichi Kohno, Yusuke Kawano, Keizo Morimoto, Shinji Muta, Rie Fujiwara, Motohiro Kawamura, Naoko Okuno, Tetsuo Yoshida, Soichiro Yokoyama, Minato Suda, Rumi Saiki, Ryota Suzuki, Kenji Kumazawa, Itsuo Fujii, Yasuhisa BMC Urol Research BACKGROUND: Recent increased use of medical images induces further burden of their interpretation for physicians. A plain X-ray is a low-cost examination that has low-dose radiation exposure and high availability, although diagnosing urolithiasis using this method is not always easy. Since the advent of a convolutional neural network via deep learning in the 2000s, computer-aided diagnosis (CAD) has had a great impact on automatic image analysis in the urological field. The objective of our study was to develop a CAD system with deep learning architecture to detect urinary tract stones on a plain X-ray and to evaluate the model’s accuracy. METHODS: We collected plain X-ray images of 1017 patients with a radio-opaque upper urinary tract stone. X-ray images (n = 827 and 190) were used as the training and test data, respectively. We used a 17-layer Residual Network as a convolutional neural network architecture for patch-wise training. The training data were repeatedly used until the best model accuracy was achieved within 300 runs. The F score, which is a harmonic mean of the sensitivity and positive predictive value (PPV) and represents the balance of the accuracy, was measured to evaluate the model’s accuracy. RESULTS: Using deep learning, we developed a CAD model that needed 110 ms to provide an answer for each X-ray image. The best F score was 0.752, and the sensitivity and PPV were 0.872 and 0.662, respectively. When limited to a proximal ureter stone, the sensitivity and PPV were 0.925 and 0.876, respectively, and they were the lowest at mid-ureter. CONCLUSION: CAD of a plain X-ray may be a promising method to detect radio-opaque urinary tract stones with satisfactory sensitivity although the PPV could still be improved. The CAD model detects urinary tract stones quickly and automatically and has the potential to become a helpful screening modality especially for primary care physicians for diagnosing urolithiasis. Further study using a higher volume of data would improve the diagnostic performance of CAD models to detect urinary tract stones on a plain X-ray. BioMed Central 2021-08-05 /pmc/articles/PMC8340490/ /pubmed/34353306 http://dx.doi.org/10.1186/s12894-021-00874-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Kobayashi, Masaki
Ishioka, Junichiro
Matsuoka, Yoh
Fukuda, Yuichi
Kohno, Yusuke
Kawano, Keizo
Morimoto, Shinji
Muta, Rie
Fujiwara, Motohiro
Kawamura, Naoko
Okuno, Tetsuo
Yoshida, Soichiro
Yokoyama, Minato
Suda, Rumi
Saiki, Ryota
Suzuki, Kenji
Kumazawa, Itsuo
Fujii, Yasuhisa
Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title_full Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title_fullStr Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title_full_unstemmed Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title_short Computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain X-ray
title_sort computer-aided diagnosis with a convolutional neural network algorithm for automated detection of urinary tract stones on plain x-ray
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8340490/
https://www.ncbi.nlm.nih.gov/pubmed/34353306
http://dx.doi.org/10.1186/s12894-021-00874-9
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