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Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis

Liver fibrosis results from the imbalance between extracellular matrix (ECM) production and degradation, which is a common pathological consequence of various chronic liver diseases. Although many miRNAs have been reported in liver fibrosis progression, miRNA-mRNA interactions in its reversal proces...

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Autores principales: Tai, Yang, Zhao, Chong, Lan, Tian, Zhang, Linhao, Xiao, Yang, Tong, Huan, Liu, Rui, Tang, Chengwei, Gao, Jinhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8340883/
https://www.ncbi.nlm.nih.gov/pubmed/34367261
http://dx.doi.org/10.3389/fgene.2021.706341
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author Tai, Yang
Zhao, Chong
Lan, Tian
Zhang, Linhao
Xiao, Yang
Tong, Huan
Liu, Rui
Tang, Chengwei
Gao, Jinhang
author_facet Tai, Yang
Zhao, Chong
Lan, Tian
Zhang, Linhao
Xiao, Yang
Tong, Huan
Liu, Rui
Tang, Chengwei
Gao, Jinhang
author_sort Tai, Yang
collection PubMed
description Liver fibrosis results from the imbalance between extracellular matrix (ECM) production and degradation, which is a common pathological consequence of various chronic liver diseases. Although many miRNAs have been reported in liver fibrosis progression, miRNA-mRNA interactions in its reversal process remain to be elucidated. In the current study, we performed an integrated analysis of miRNA and mRNA expression profiles in the mouse model with the spontaneous reversal potency of liver fibrosis. A total of 102 miRNA and 2,845 mRNAs showed significant differential expression in reversal mice compared to fibrotic mice. Moreover, 3,769 putative negatively correlated miRNA-mRNA pairs were revealed to be potentially implicated in the biological function regulation of small molecule metabolism and ECM organization. By integrating miRNA-mRNA regulatory networks, mmu-miR-1843a-5p, mmu-miR-193a-5p, mmu-miR-194-2-3p, and mmu-miR-30c-2-3p were identified as lysyl oxidases-specific miRNAs that were correlated with fibrosis reversal. Our results provided potential candidate targets for the treatment of liver fibrosis.
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spelling pubmed-83408832021-08-06 Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis Tai, Yang Zhao, Chong Lan, Tian Zhang, Linhao Xiao, Yang Tong, Huan Liu, Rui Tang, Chengwei Gao, Jinhang Front Genet Genetics Liver fibrosis results from the imbalance between extracellular matrix (ECM) production and degradation, which is a common pathological consequence of various chronic liver diseases. Although many miRNAs have been reported in liver fibrosis progression, miRNA-mRNA interactions in its reversal process remain to be elucidated. In the current study, we performed an integrated analysis of miRNA and mRNA expression profiles in the mouse model with the spontaneous reversal potency of liver fibrosis. A total of 102 miRNA and 2,845 mRNAs showed significant differential expression in reversal mice compared to fibrotic mice. Moreover, 3,769 putative negatively correlated miRNA-mRNA pairs were revealed to be potentially implicated in the biological function regulation of small molecule metabolism and ECM organization. By integrating miRNA-mRNA regulatory networks, mmu-miR-1843a-5p, mmu-miR-193a-5p, mmu-miR-194-2-3p, and mmu-miR-30c-2-3p were identified as lysyl oxidases-specific miRNAs that were correlated with fibrosis reversal. Our results provided potential candidate targets for the treatment of liver fibrosis. Frontiers Media S.A. 2021-07-22 /pmc/articles/PMC8340883/ /pubmed/34367261 http://dx.doi.org/10.3389/fgene.2021.706341 Text en Copyright © 2021 Tai, Zhao, Lan, Zhang, Xiao, Tong, Liu, Tang and Gao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Tai, Yang
Zhao, Chong
Lan, Tian
Zhang, Linhao
Xiao, Yang
Tong, Huan
Liu, Rui
Tang, Chengwei
Gao, Jinhang
Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title_full Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title_fullStr Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title_full_unstemmed Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title_short Integrated Analysis of Hepatic miRNA and mRNA Expression Profiles in the Spontaneous Reversal Process of Liver Fibrosis
title_sort integrated analysis of hepatic mirna and mrna expression profiles in the spontaneous reversal process of liver fibrosis
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8340883/
https://www.ncbi.nlm.nih.gov/pubmed/34367261
http://dx.doi.org/10.3389/fgene.2021.706341
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