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CONSULT: accurate contamination removal using locality-sensitive hashing
A fundamental question appears in many bioinformatics applications: Does a sequencing read belong to a large dataset of genomes from some broad taxonomic group, even when the closest match in the set is evolutionarily divergent from the query? For example, low-coverage genome sequencing (skimming) p...
Autores principales: | Rachtman, Eleonora, Bafna, Vineet, Mirarab, Siavash |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8340999/ https://www.ncbi.nlm.nih.gov/pubmed/34377979 http://dx.doi.org/10.1093/nargab/lqab071 |
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