Cargando…

A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing

Although long noncoding RNAs (lncRNAs) are transcripts that do not encode proteins by definition, some lncRNAs actually contain small open reading frames that are translated. TINCR (terminal differentiation–induced ncRNA) has been recognized as a lncRNA that contributes to keratinocyte differentiati...

Descripción completa

Detalles Bibliográficos
Autores principales: Nita, Akihiro, Matsumoto, Akinobu, Tang, Ronghao, Shiraishi, Chisa, Ichihara, Kazuya, Saito, Daisuke, Suyama, Mikita, Yasuda, Tomoharu, Tsuji, Gaku, Furue, Masutaka, Katayama, Bumpei, Ozawa, Toshiyuki, Murata, Teruasa, Dainichi, Teruki, Kabashima, Kenji, Hatano, Atsushi, Matsumoto, Masaki, Nakayama, Keiichi I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8341662/
https://www.ncbi.nlm.nih.gov/pubmed/34351912
http://dx.doi.org/10.1371/journal.pgen.1009686
_version_ 1783733959422640128
author Nita, Akihiro
Matsumoto, Akinobu
Tang, Ronghao
Shiraishi, Chisa
Ichihara, Kazuya
Saito, Daisuke
Suyama, Mikita
Yasuda, Tomoharu
Tsuji, Gaku
Furue, Masutaka
Katayama, Bumpei
Ozawa, Toshiyuki
Murata, Teruasa
Dainichi, Teruki
Kabashima, Kenji
Hatano, Atsushi
Matsumoto, Masaki
Nakayama, Keiichi I.
author_facet Nita, Akihiro
Matsumoto, Akinobu
Tang, Ronghao
Shiraishi, Chisa
Ichihara, Kazuya
Saito, Daisuke
Suyama, Mikita
Yasuda, Tomoharu
Tsuji, Gaku
Furue, Masutaka
Katayama, Bumpei
Ozawa, Toshiyuki
Murata, Teruasa
Dainichi, Teruki
Kabashima, Kenji
Hatano, Atsushi
Matsumoto, Masaki
Nakayama, Keiichi I.
author_sort Nita, Akihiro
collection PubMed
description Although long noncoding RNAs (lncRNAs) are transcripts that do not encode proteins by definition, some lncRNAs actually contain small open reading frames that are translated. TINCR (terminal differentiation–induced ncRNA) has been recognized as a lncRNA that contributes to keratinocyte differentiation. However, we here show that TINCR encodes a ubiquitin-like protein that is well conserved among species and whose expression was confirmed by the generation of mice harboring a FLAG epitope tag sequence in the endogenous open reading frame as well as by targeted proteomics. Forced expression of this protein promoted cell cycle progression in normal human epidermal keratinocytes, and mice lacking this protein manifested a delay in skin wound healing associated with attenuated cell cycle progression in keratinocytes. We termed this protein TINCR-encoded ubiquitin-like protein (TUBL), and our results reveal a role for TINCR in the regulation of keratinocyte proliferation and skin regeneration that is dependent on TUBL.
format Online
Article
Text
id pubmed-8341662
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-83416622021-08-06 A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing Nita, Akihiro Matsumoto, Akinobu Tang, Ronghao Shiraishi, Chisa Ichihara, Kazuya Saito, Daisuke Suyama, Mikita Yasuda, Tomoharu Tsuji, Gaku Furue, Masutaka Katayama, Bumpei Ozawa, Toshiyuki Murata, Teruasa Dainichi, Teruki Kabashima, Kenji Hatano, Atsushi Matsumoto, Masaki Nakayama, Keiichi I. PLoS Genet Research Article Although long noncoding RNAs (lncRNAs) are transcripts that do not encode proteins by definition, some lncRNAs actually contain small open reading frames that are translated. TINCR (terminal differentiation–induced ncRNA) has been recognized as a lncRNA that contributes to keratinocyte differentiation. However, we here show that TINCR encodes a ubiquitin-like protein that is well conserved among species and whose expression was confirmed by the generation of mice harboring a FLAG epitope tag sequence in the endogenous open reading frame as well as by targeted proteomics. Forced expression of this protein promoted cell cycle progression in normal human epidermal keratinocytes, and mice lacking this protein manifested a delay in skin wound healing associated with attenuated cell cycle progression in keratinocytes. We termed this protein TINCR-encoded ubiquitin-like protein (TUBL), and our results reveal a role for TINCR in the regulation of keratinocyte proliferation and skin regeneration that is dependent on TUBL. Public Library of Science 2021-08-05 /pmc/articles/PMC8341662/ /pubmed/34351912 http://dx.doi.org/10.1371/journal.pgen.1009686 Text en © 2021 Nita et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nita, Akihiro
Matsumoto, Akinobu
Tang, Ronghao
Shiraishi, Chisa
Ichihara, Kazuya
Saito, Daisuke
Suyama, Mikita
Yasuda, Tomoharu
Tsuji, Gaku
Furue, Masutaka
Katayama, Bumpei
Ozawa, Toshiyuki
Murata, Teruasa
Dainichi, Teruki
Kabashima, Kenji
Hatano, Atsushi
Matsumoto, Masaki
Nakayama, Keiichi I.
A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title_full A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title_fullStr A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title_full_unstemmed A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title_short A ubiquitin-like protein encoded by the “noncoding” RNA TINCR promotes keratinocyte proliferation and wound healing
title_sort ubiquitin-like protein encoded by the “noncoding” rna tincr promotes keratinocyte proliferation and wound healing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8341662/
https://www.ncbi.nlm.nih.gov/pubmed/34351912
http://dx.doi.org/10.1371/journal.pgen.1009686
work_keys_str_mv AT nitaakihiro aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT matsumotoakinobu aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT tangronghao aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT shiraishichisa aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT ichiharakazuya aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT saitodaisuke aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT suyamamikita aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT yasudatomoharu aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT tsujigaku aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT furuemasutaka aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT katayamabumpei aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT ozawatoshiyuki aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT muratateruasa aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT dainichiteruki aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT kabashimakenji aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT hatanoatsushi aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT matsumotomasaki aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT nakayamakeiichii aubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT nitaakihiro ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT matsumotoakinobu ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT tangronghao ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT shiraishichisa ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT ichiharakazuya ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT saitodaisuke ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT suyamamikita ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT yasudatomoharu ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT tsujigaku ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT furuemasutaka ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT katayamabumpei ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT ozawatoshiyuki ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT muratateruasa ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT dainichiteruki ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT kabashimakenji ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT hatanoatsushi ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT matsumotomasaki ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing
AT nakayamakeiichii ubiquitinlikeproteinencodedbythenoncodingrnatincrpromoteskeratinocyteproliferationandwoundhealing