Cargando…
Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations
Radiologic images provide a way to monitor tumor development and its response to therapies in a longitudinal and minimally invasive fashion. However, they operate on a macroscopic scale (average value per voxel) and are not able to capture microscopic scale (cell-level) phenomena. Nevertheless, to e...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8341701/ https://www.ncbi.nlm.nih.gov/pubmed/34310608 http://dx.doi.org/10.1371/journal.pcbi.1009206 |
_version_ | 1783733963603312640 |
---|---|
author | Kingsley, Jessica L. Costello, James R. Raghunand, Natarajan Rejniak, Katarzyna A. |
author_facet | Kingsley, Jessica L. Costello, James R. Raghunand, Natarajan Rejniak, Katarzyna A. |
author_sort | Kingsley, Jessica L. |
collection | PubMed |
description | Radiologic images provide a way to monitor tumor development and its response to therapies in a longitudinal and minimally invasive fashion. However, they operate on a macroscopic scale (average value per voxel) and are not able to capture microscopic scale (cell-level) phenomena. Nevertheless, to examine the causes of frequent fast fluctuations in tissue oxygenation, models simulating individual cells’ behavior are needed. Here, we provide a link between the average data values recorded for radiologic images and the cellular and vascular architecture of the corresponding tissues. Using hybrid agent-based modeling, we generate a set of tissue morphologies capable of reproducing oxygenation levels observed in radiologic images. We then use these in silico tissues to investigate whether oxygen fluctuations can be explained by changes in vascular oxygen supply or by modulations in cellular oxygen absorption. Our studies show that intravascular changes in oxygen supply reproduce the observed fluctuations in tissue oxygenation in all considered regions of interest. However, larger-magnitude fluctuations cannot be recreated by modifications in cellular absorption of oxygen in a biologically feasible manner. Additionally, we develop a procedure to identify plausible tissue morphologies for a given temporal series of average data from radiology images. In future applications, this approach can be used to generate a set of tissues comparable with radiology images and to simulate tumor responses to various anti-cancer treatments at the tissue-scale level. |
format | Online Article Text |
id | pubmed-8341701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-83417012021-08-06 Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations Kingsley, Jessica L. Costello, James R. Raghunand, Natarajan Rejniak, Katarzyna A. PLoS Comput Biol Research Article Radiologic images provide a way to monitor tumor development and its response to therapies in a longitudinal and minimally invasive fashion. However, they operate on a macroscopic scale (average value per voxel) and are not able to capture microscopic scale (cell-level) phenomena. Nevertheless, to examine the causes of frequent fast fluctuations in tissue oxygenation, models simulating individual cells’ behavior are needed. Here, we provide a link between the average data values recorded for radiologic images and the cellular and vascular architecture of the corresponding tissues. Using hybrid agent-based modeling, we generate a set of tissue morphologies capable of reproducing oxygenation levels observed in radiologic images. We then use these in silico tissues to investigate whether oxygen fluctuations can be explained by changes in vascular oxygen supply or by modulations in cellular oxygen absorption. Our studies show that intravascular changes in oxygen supply reproduce the observed fluctuations in tissue oxygenation in all considered regions of interest. However, larger-magnitude fluctuations cannot be recreated by modifications in cellular absorption of oxygen in a biologically feasible manner. Additionally, we develop a procedure to identify plausible tissue morphologies for a given temporal series of average data from radiology images. In future applications, this approach can be used to generate a set of tissues comparable with radiology images and to simulate tumor responses to various anti-cancer treatments at the tissue-scale level. Public Library of Science 2021-07-26 /pmc/articles/PMC8341701/ /pubmed/34310608 http://dx.doi.org/10.1371/journal.pcbi.1009206 Text en © 2021 Kingsley et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kingsley, Jessica L. Costello, James R. Raghunand, Natarajan Rejniak, Katarzyna A. Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title | Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title_full | Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title_fullStr | Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title_full_unstemmed | Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title_short | Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
title_sort | bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8341701/ https://www.ncbi.nlm.nih.gov/pubmed/34310608 http://dx.doi.org/10.1371/journal.pcbi.1009206 |
work_keys_str_mv | AT kingsleyjessical bridgingcellscalesimulationsandradiologicimagestoexplainshorttimeintratumoraloxygenfluctuations AT costellojamesr bridgingcellscalesimulationsandradiologicimagestoexplainshorttimeintratumoraloxygenfluctuations AT raghunandnatarajan bridgingcellscalesimulationsandradiologicimagestoexplainshorttimeintratumoraloxygenfluctuations AT rejniakkatarzynaa bridgingcellscalesimulationsandradiologicimagestoexplainshorttimeintratumoraloxygenfluctuations |