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Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning

Rapid varieties classification of crop seeds is significant for breeders to screen out seeds with specific traits and market regulators to detect seed purity. However, collecting high-quality, large-scale samples takes high costs in some cases, making it difficult to build an accurate classification...

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Autores principales: Wu, Na, Liu, Fei, Meng, Fanjia, Li, Mu, Zhang, Chu, He, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8343196/
https://www.ncbi.nlm.nih.gov/pubmed/34368096
http://dx.doi.org/10.3389/fbioe.2021.696292
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author Wu, Na
Liu, Fei
Meng, Fanjia
Li, Mu
Zhang, Chu
He, Yong
author_facet Wu, Na
Liu, Fei
Meng, Fanjia
Li, Mu
Zhang, Chu
He, Yong
author_sort Wu, Na
collection PubMed
description Rapid varieties classification of crop seeds is significant for breeders to screen out seeds with specific traits and market regulators to detect seed purity. However, collecting high-quality, large-scale samples takes high costs in some cases, making it difficult to build an accurate classification model. This study aimed to explore a rapid and accurate method for varieties classification of different crop seeds under the sample-limited condition based on hyperspectral imaging (HSI) and deep transfer learning. Three deep neural networks with typical structures were designed based on a sample-rich Pea dataset. Obtained the highest accuracy of 99.57%, VGG-MODEL was transferred to classify four target datasets (rice, oat, wheat, and cotton) with limited samples. Accuracies of the deep transferred model achieved 95, 99, 80.8, and 83.86% on the four datasets, respectively. Using training sets with different sizes, the deep transferred model could always obtain higher performance than other traditional methods. The visualization of the deep features and classification results confirmed the portability of the shared features of seed spectra, providing an interpreted method for rapid and accurate varieties classification of crop seeds. The overall results showed great superiority of HSI combined with deep transfer learning for seed detection under sample-limited condition. This study provided a new idea for facilitating a crop germplasm screening process under the scenario of sample scarcity and the detection of other qualities of crop seeds under sample-limited condition based on HSI.
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spelling pubmed-83431962021-08-07 Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning Wu, Na Liu, Fei Meng, Fanjia Li, Mu Zhang, Chu He, Yong Front Bioeng Biotechnol Bioengineering and Biotechnology Rapid varieties classification of crop seeds is significant for breeders to screen out seeds with specific traits and market regulators to detect seed purity. However, collecting high-quality, large-scale samples takes high costs in some cases, making it difficult to build an accurate classification model. This study aimed to explore a rapid and accurate method for varieties classification of different crop seeds under the sample-limited condition based on hyperspectral imaging (HSI) and deep transfer learning. Three deep neural networks with typical structures were designed based on a sample-rich Pea dataset. Obtained the highest accuracy of 99.57%, VGG-MODEL was transferred to classify four target datasets (rice, oat, wheat, and cotton) with limited samples. Accuracies of the deep transferred model achieved 95, 99, 80.8, and 83.86% on the four datasets, respectively. Using training sets with different sizes, the deep transferred model could always obtain higher performance than other traditional methods. The visualization of the deep features and classification results confirmed the portability of the shared features of seed spectra, providing an interpreted method for rapid and accurate varieties classification of crop seeds. The overall results showed great superiority of HSI combined with deep transfer learning for seed detection under sample-limited condition. This study provided a new idea for facilitating a crop germplasm screening process under the scenario of sample scarcity and the detection of other qualities of crop seeds under sample-limited condition based on HSI. Frontiers Media S.A. 2021-07-23 /pmc/articles/PMC8343196/ /pubmed/34368096 http://dx.doi.org/10.3389/fbioe.2021.696292 Text en Copyright © 2021 Wu, Liu, Meng, Li, Zhang and He. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Wu, Na
Liu, Fei
Meng, Fanjia
Li, Mu
Zhang, Chu
He, Yong
Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title_full Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title_fullStr Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title_full_unstemmed Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title_short Rapid and Accurate Varieties Classification of Different Crop Seeds Under Sample-Limited Condition Based on Hyperspectral Imaging and Deep Transfer Learning
title_sort rapid and accurate varieties classification of different crop seeds under sample-limited condition based on hyperspectral imaging and deep transfer learning
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8343196/
https://www.ncbi.nlm.nih.gov/pubmed/34368096
http://dx.doi.org/10.3389/fbioe.2021.696292
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