Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis

Bosmina is a globally distributed zooplankton that adapts to a eutrophic environment. In this study, we cultivated monoclonal Bosmina fatalis and determined its complete mitochondrial gene sequence using the Illumina HiSeq 4000 platform. It was 15,209 bp in length, including 13 protein-coding genes,...

Descripción completa

Detalles Bibliográficos
Autores principales: Wei, Wenzhi, Zhang, Kai, Shi, Qun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8344229/
https://www.ncbi.nlm.nih.gov/pubmed/34377831
http://dx.doi.org/10.1080/23802359.2021.1959442
_version_ 1783734448274014208
author Wei, Wenzhi
Zhang, Kai
Shi, Qun
author_facet Wei, Wenzhi
Zhang, Kai
Shi, Qun
author_sort Wei, Wenzhi
collection PubMed
description Bosmina is a globally distributed zooplankton that adapts to a eutrophic environment. In this study, we cultivated monoclonal Bosmina fatalis and determined its complete mitochondrial gene sequence using the Illumina HiSeq 4000 platform. It was 15,209 bp in length, including 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with the A + T content (69.2%) significantly higher than the G + C content (30.9%). All 22 typical tRNA genes had a classical cloverleaf structure, except for tRNAIle. The complete mitochondrial genome of nine other cladoceran species was used to reconstruct a phylogenetic tree, showing that B. fatalis has a closer relationship with Daphnia than other cladocerans.
format Online
Article
Text
id pubmed-8344229
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-83442292021-08-09 Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis Wei, Wenzhi Zhang, Kai Shi, Qun Mitochondrial DNA B Resour Mitogenome Announcement Bosmina is a globally distributed zooplankton that adapts to a eutrophic environment. In this study, we cultivated monoclonal Bosmina fatalis and determined its complete mitochondrial gene sequence using the Illumina HiSeq 4000 platform. It was 15,209 bp in length, including 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with the A + T content (69.2%) significantly higher than the G + C content (30.9%). All 22 typical tRNA genes had a classical cloverleaf structure, except for tRNAIle. The complete mitochondrial genome of nine other cladoceran species was used to reconstruct a phylogenetic tree, showing that B. fatalis has a closer relationship with Daphnia than other cladocerans. Taylor & Francis 2021-08-05 /pmc/articles/PMC8344229/ /pubmed/34377831 http://dx.doi.org/10.1080/23802359.2021.1959442 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wei, Wenzhi
Zhang, Kai
Shi, Qun
Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title_full Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title_fullStr Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title_full_unstemmed Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title_short Complete mitochondrial genome of Bosmina fatalis (Cladocera: Bosminidae) and its phylogenetic analysis
title_sort complete mitochondrial genome of bosmina fatalis (cladocera: bosminidae) and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8344229/
https://www.ncbi.nlm.nih.gov/pubmed/34377831
http://dx.doi.org/10.1080/23802359.2021.1959442
work_keys_str_mv AT weiwenzhi completemitochondrialgenomeofbosminafataliscladocerabosminidaeanditsphylogeneticanalysis
AT zhangkai completemitochondrialgenomeofbosminafataliscladocerabosminidaeanditsphylogeneticanalysis
AT shiqun completemitochondrialgenomeofbosminafataliscladocerabosminidaeanditsphylogeneticanalysis

Ejemplares similares