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Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol

INTRODUCTION: Current tuberculosis triage and predictive tools offer poor accuracy and are ineffective for detecting asymptomatic disease in people living with HIV (PLHIV). Host tuberculosis transcriptomic biomarkers hold promise for diagnosing prevalent and predicting progression to incident tuberc...

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Autores principales: Mendelsohn, Simon C, Mulenga, Humphrey, Mbandi, Stanley Kimbung, Darboe, Fatoumatta, Shelton, Mary, Scriba, Thomas J, Hatherill, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8344288/
https://www.ncbi.nlm.nih.gov/pubmed/34353800
http://dx.doi.org/10.1136/bmjopen-2021-048623
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author Mendelsohn, Simon C
Mulenga, Humphrey
Mbandi, Stanley Kimbung
Darboe, Fatoumatta
Shelton, Mary
Scriba, Thomas J
Hatherill, Mark
author_facet Mendelsohn, Simon C
Mulenga, Humphrey
Mbandi, Stanley Kimbung
Darboe, Fatoumatta
Shelton, Mary
Scriba, Thomas J
Hatherill, Mark
author_sort Mendelsohn, Simon C
collection PubMed
description INTRODUCTION: Current tuberculosis triage and predictive tools offer poor accuracy and are ineffective for detecting asymptomatic disease in people living with HIV (PLHIV). Host tuberculosis transcriptomic biomarkers hold promise for diagnosing prevalent and predicting progression to incident tuberculosis and guiding further investigation, preventive therapy and follow-up. We aim to conduct a systematic review of performance of transcriptomic signatures of tuberculosis in PLHIV. METHODS AND ANALYSIS: We will search MEDLINE (PubMed), WOS Core Collection, Biological Abstracts, and SciELO Citation Index (Web of Science), Africa-Wide Information and General Science Abstracts (EBSCOhost), Scopus, and Cochrane Central Register of Controlled Trials databases for articles published in English between 1990 and 2020. Case–control, cross-sectional, cohort and randomised controlled studies evaluating performance of diagnostic and prognostic host-response transcriptomic signatures in PLHIV of all ages and settings will be included. Eligible studies will include PLHIV in signature test or validation cohorts, and use microbiological, clinical, or composite reference standards for pulmonary or extrapulmonary tuberculosis diagnosis. Study quality will be evaluated using the ‘Quality Assessment of Diagnostic Accuracy Studies-2’ tool and cumulative review evidence assessed using the ‘Grading of Recommendations Assessment, Development and Evaluation’ approach. Study selection, quality appraisal and data extraction will be performed independently by two reviewers. Study, cohort and signature characteristics of included studies will be tabulated, and a narrative synthesis of findings presented. Primary outcomes of interest, biomarker sensitivity and specificity with estimate precision, will be summarised in forest plots. Expected heterogeneity in signature characteristics, study settings, and study designs precludes meta-analysis and pooling of results. Review reporting will follow the Preferred Reporting Items for Systematic Reviews and Meta-Analyses of Diagnostic Test Accuracy Studies guidelines. ETHICS AND DISSEMINATION: Formal ethics approval is not required as primary human participant data will not be collected. Results will be disseminated through peer-reviewed publication and conference presentation. PROSPERO REGISTRATION NUMBER: CRD42021224155.
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spelling pubmed-83442882021-08-20 Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol Mendelsohn, Simon C Mulenga, Humphrey Mbandi, Stanley Kimbung Darboe, Fatoumatta Shelton, Mary Scriba, Thomas J Hatherill, Mark BMJ Open Infectious Diseases INTRODUCTION: Current tuberculosis triage and predictive tools offer poor accuracy and are ineffective for detecting asymptomatic disease in people living with HIV (PLHIV). Host tuberculosis transcriptomic biomarkers hold promise for diagnosing prevalent and predicting progression to incident tuberculosis and guiding further investigation, preventive therapy and follow-up. We aim to conduct a systematic review of performance of transcriptomic signatures of tuberculosis in PLHIV. METHODS AND ANALYSIS: We will search MEDLINE (PubMed), WOS Core Collection, Biological Abstracts, and SciELO Citation Index (Web of Science), Africa-Wide Information and General Science Abstracts (EBSCOhost), Scopus, and Cochrane Central Register of Controlled Trials databases for articles published in English between 1990 and 2020. Case–control, cross-sectional, cohort and randomised controlled studies evaluating performance of diagnostic and prognostic host-response transcriptomic signatures in PLHIV of all ages and settings will be included. Eligible studies will include PLHIV in signature test or validation cohorts, and use microbiological, clinical, or composite reference standards for pulmonary or extrapulmonary tuberculosis diagnosis. Study quality will be evaluated using the ‘Quality Assessment of Diagnostic Accuracy Studies-2’ tool and cumulative review evidence assessed using the ‘Grading of Recommendations Assessment, Development and Evaluation’ approach. Study selection, quality appraisal and data extraction will be performed independently by two reviewers. Study, cohort and signature characteristics of included studies will be tabulated, and a narrative synthesis of findings presented. Primary outcomes of interest, biomarker sensitivity and specificity with estimate precision, will be summarised in forest plots. Expected heterogeneity in signature characteristics, study settings, and study designs precludes meta-analysis and pooling of results. Review reporting will follow the Preferred Reporting Items for Systematic Reviews and Meta-Analyses of Diagnostic Test Accuracy Studies guidelines. ETHICS AND DISSEMINATION: Formal ethics approval is not required as primary human participant data will not be collected. Results will be disseminated through peer-reviewed publication and conference presentation. PROSPERO REGISTRATION NUMBER: CRD42021224155. BMJ Publishing Group 2021-08-05 /pmc/articles/PMC8344288/ /pubmed/34353800 http://dx.doi.org/10.1136/bmjopen-2021-048623 Text en © Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Infectious Diseases
Mendelsohn, Simon C
Mulenga, Humphrey
Mbandi, Stanley Kimbung
Darboe, Fatoumatta
Shelton, Mary
Scriba, Thomas J
Hatherill, Mark
Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title_full Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title_fullStr Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title_full_unstemmed Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title_short Host blood transcriptomic biomarkers of tuberculosis disease in people living with HIV: a systematic review protocol
title_sort host blood transcriptomic biomarkers of tuberculosis disease in people living with hiv: a systematic review protocol
topic Infectious Diseases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8344288/
https://www.ncbi.nlm.nih.gov/pubmed/34353800
http://dx.doi.org/10.1136/bmjopen-2021-048623
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