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System concentration shift as a regulator of transcription-translation system within liposomes

Biochemical systems in living cells have their optimum concentration ratio among each constituent element to maintain their functionality. However, in the case of the biochemical system with complex interactions and feedbacks among elements, their activity as a system greatly changes by the concentr...

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Detalles Bibliográficos
Autores principales: Akui, Toshiki, Fujiwara, Kei, Sato, Gaku, Takinoue, Masahiro, Nomura, Shin-ichiro M., Doi, Nobuhide
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8346668/
https://www.ncbi.nlm.nih.gov/pubmed/34386726
http://dx.doi.org/10.1016/j.isci.2021.102859
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author Akui, Toshiki
Fujiwara, Kei
Sato, Gaku
Takinoue, Masahiro
Nomura, Shin-ichiro M.
Doi, Nobuhide
author_facet Akui, Toshiki
Fujiwara, Kei
Sato, Gaku
Takinoue, Masahiro
Nomura, Shin-ichiro M.
Doi, Nobuhide
author_sort Akui, Toshiki
collection PubMed
description Biochemical systems in living cells have their optimum concentration ratio among each constituent element to maintain their functionality. However, in the case of the biochemical system with complex interactions and feedbacks among elements, their activity as a system greatly changes by the concentration shift of the entire system irrespective of the concentration ratio among elements. In this study, by using a transcription-translation (TX-TL) system as the subject, we illustrate the principle of the nonlinear relationship between the system concentration and the activity of the system. Our experiment and simulation showed that shifts of the system concentration of TX-TL by dilution and concentration works as a switch of activity and demonstrated its ability to induce a biochemical system to confer the permeability of small molecules to liposomes. These results contribute to the creation of artificial cells with the switch and provide an insight into the emergence of protocells.
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spelling pubmed-83466682021-08-11 System concentration shift as a regulator of transcription-translation system within liposomes Akui, Toshiki Fujiwara, Kei Sato, Gaku Takinoue, Masahiro Nomura, Shin-ichiro M. Doi, Nobuhide iScience Article Biochemical systems in living cells have their optimum concentration ratio among each constituent element to maintain their functionality. However, in the case of the biochemical system with complex interactions and feedbacks among elements, their activity as a system greatly changes by the concentration shift of the entire system irrespective of the concentration ratio among elements. In this study, by using a transcription-translation (TX-TL) system as the subject, we illustrate the principle of the nonlinear relationship between the system concentration and the activity of the system. Our experiment and simulation showed that shifts of the system concentration of TX-TL by dilution and concentration works as a switch of activity and demonstrated its ability to induce a biochemical system to confer the permeability of small molecules to liposomes. These results contribute to the creation of artificial cells with the switch and provide an insight into the emergence of protocells. Elsevier 2021-07-14 /pmc/articles/PMC8346668/ /pubmed/34386726 http://dx.doi.org/10.1016/j.isci.2021.102859 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Akui, Toshiki
Fujiwara, Kei
Sato, Gaku
Takinoue, Masahiro
Nomura, Shin-ichiro M.
Doi, Nobuhide
System concentration shift as a regulator of transcription-translation system within liposomes
title System concentration shift as a regulator of transcription-translation system within liposomes
title_full System concentration shift as a regulator of transcription-translation system within liposomes
title_fullStr System concentration shift as a regulator of transcription-translation system within liposomes
title_full_unstemmed System concentration shift as a regulator of transcription-translation system within liposomes
title_short System concentration shift as a regulator of transcription-translation system within liposomes
title_sort system concentration shift as a regulator of transcription-translation system within liposomes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8346668/
https://www.ncbi.nlm.nih.gov/pubmed/34386726
http://dx.doi.org/10.1016/j.isci.2021.102859
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