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OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis

PURPOSE: Machine learning (ML) applications in predictive models in neuro-oncology have become an increasingly investigated subject of research. For their incorporation into clinical practice, rigorous assessment is needed to reduce bias. Several reports have indicated utility of ML applications in...

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Autores principales: Jekel, Leon, Brim, Waverly Rose, Petersen, Gabriel Cassinelli, Subramanian, Harry, Zeevi, Tal, Payabvash, Seyedmehdi, Bousabarah, Khaled, Lin, MingDe, Cui, Jin, Brackett, Alexandria, Johnson, Michele, Malhotra, Ajay, Aboian, Mariam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351195/
http://dx.doi.org/10.1093/noajnl/vdab071.070
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author Jekel, Leon
Brim, Waverly Rose
Petersen, Gabriel Cassinelli
Subramanian, Harry
Zeevi, Tal
Payabvash, Seyedmehdi
Bousabarah, Khaled
Lin, MingDe
Cui, Jin
Brackett, Alexandria
Johnson, Michele
Malhotra, Ajay
Aboian, Mariam
author_facet Jekel, Leon
Brim, Waverly Rose
Petersen, Gabriel Cassinelli
Subramanian, Harry
Zeevi, Tal
Payabvash, Seyedmehdi
Bousabarah, Khaled
Lin, MingDe
Cui, Jin
Brackett, Alexandria
Johnson, Michele
Malhotra, Ajay
Aboian, Mariam
author_sort Jekel, Leon
collection PubMed
description PURPOSE: Machine learning (ML) applications in predictive models in neuro-oncology have become an increasingly investigated subject of research. For their incorporation into clinical practice, rigorous assessment is needed to reduce bias. Several reports have indicated utility of ML applications in differentiation of glioma from brain metastasis. However, a systematic assessment of quality of methodology and reporting in these studies has not been done yet. We examined the adherence of 29 published reports in this field to the TRIPOD statement, which is similar to CLAIM checklist. MATERIALS AND METHODS: Our systematic review was conducted in accordance with PRISMA guidelines. Ovid Embase, Ovid MEDLINE, Cochrane trials (CENTRAL) and Web of science core-collection were searched. Keywords included artificial intelligence, machine learning, deep learning, radiomics, magnetic resonance imaging, glioma, and glioblastoma. Assessment of TRIPOD adherence in 29 eligible studies was performed. Individual item performance was assessed by adherence index (ADI), the ratio of mean achieved score to maximum score per TRIPOD item. RESULTS: In a preliminary analysis of 8 studies, the average TRIPOD adherence score was 0.48 (14.25/30 items fulfilled) with individual scores ranging from 0.27 (8/30) to 0.60 (18/30). Best overall item performance, with an ADI of 1, was seen in item 3 (Background/Objectives), 16 (Model performance) and 19 (Interpretation). Poorest performance was detected in item 1 (Title) and 2 (Abstract), followed by item 9 (Missing Data) with ADI of 0, 0 and 0.13, respectively. CONCLUSION: Preliminary results underline the lack of reproducibility in ML studies on distinction between glioma and brain metastasis. An average TRIPOD adherence score of 0.48 indicates insufficient quality of reporting and outlines the need for increased utilization of quality scoring systems in study documentation. Systematic evaluation of quality score adherence will allow us to identify common flaws in this field for enabling translation of models into clinical workflow.
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spelling pubmed-83511952021-08-09 OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis Jekel, Leon Brim, Waverly Rose Petersen, Gabriel Cassinelli Subramanian, Harry Zeevi, Tal Payabvash, Seyedmehdi Bousabarah, Khaled Lin, MingDe Cui, Jin Brackett, Alexandria Johnson, Michele Malhotra, Ajay Aboian, Mariam Neurooncol Adv Supplement Abstracts PURPOSE: Machine learning (ML) applications in predictive models in neuro-oncology have become an increasingly investigated subject of research. For their incorporation into clinical practice, rigorous assessment is needed to reduce bias. Several reports have indicated utility of ML applications in differentiation of glioma from brain metastasis. However, a systematic assessment of quality of methodology and reporting in these studies has not been done yet. We examined the adherence of 29 published reports in this field to the TRIPOD statement, which is similar to CLAIM checklist. MATERIALS AND METHODS: Our systematic review was conducted in accordance with PRISMA guidelines. Ovid Embase, Ovid MEDLINE, Cochrane trials (CENTRAL) and Web of science core-collection were searched. Keywords included artificial intelligence, machine learning, deep learning, radiomics, magnetic resonance imaging, glioma, and glioblastoma. Assessment of TRIPOD adherence in 29 eligible studies was performed. Individual item performance was assessed by adherence index (ADI), the ratio of mean achieved score to maximum score per TRIPOD item. RESULTS: In a preliminary analysis of 8 studies, the average TRIPOD adherence score was 0.48 (14.25/30 items fulfilled) with individual scores ranging from 0.27 (8/30) to 0.60 (18/30). Best overall item performance, with an ADI of 1, was seen in item 3 (Background/Objectives), 16 (Model performance) and 19 (Interpretation). Poorest performance was detected in item 1 (Title) and 2 (Abstract), followed by item 9 (Missing Data) with ADI of 0, 0 and 0.13, respectively. CONCLUSION: Preliminary results underline the lack of reproducibility in ML studies on distinction between glioma and brain metastasis. An average TRIPOD adherence score of 0.48 indicates insufficient quality of reporting and outlines the need for increased utilization of quality scoring systems in study documentation. Systematic evaluation of quality score adherence will allow us to identify common flaws in this field for enabling translation of models into clinical workflow. Oxford University Press 2021-08-09 /pmc/articles/PMC8351195/ http://dx.doi.org/10.1093/noajnl/vdab071.070 Text en © The Author(s) 2021. Published by Oxford University Press, the Society for Neuro-Oncology and the European Association of Neuro-Oncology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Supplement Abstracts
Jekel, Leon
Brim, Waverly Rose
Petersen, Gabriel Cassinelli
Subramanian, Harry
Zeevi, Tal
Payabvash, Seyedmehdi
Bousabarah, Khaled
Lin, MingDe
Cui, Jin
Brackett, Alexandria
Johnson, Michele
Malhotra, Ajay
Aboian, Mariam
OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title_full OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title_fullStr OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title_full_unstemmed OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title_short OTHR-15. Assessment of TRIPOD adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
title_sort othr-15. assessment of tripod adherence in articles developing machine learning models for differentiation of glioma from brain metastasis
topic Supplement Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351195/
http://dx.doi.org/10.1093/noajnl/vdab071.070
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