Cargando…
Risk profiles for negative and positive COVID-19 hospitalized patients
COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The pur...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351276/ https://www.ncbi.nlm.nih.gov/pubmed/34411902 http://dx.doi.org/10.1016/j.compbiomed.2021.104753 |
_version_ | 1783735940188995584 |
---|---|
author | Nezhadmoghadam, Fahimeh Tamez-Peña, Jose |
author_facet | Nezhadmoghadam, Fahimeh Tamez-Peña, Jose |
author_sort | Nezhadmoghadam, Fahimeh |
collection | PubMed |
description | COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The purpose of this article is to determine whether unsupervised analysis of risk factors in positive and negative COVID-19 subjects can aid in the identification of a set of reliable and clinically relevant risk profiles. Positive and negative patients hospitalized were randomly selected from the Mexican Open Registry between March and May 2020. Thirteen risk factors, three distinct outcomes, and COVID-19 test results were used to categorize registry patients. As a result, the dataset was reported via 6144 different risk profiles for each age group. The unsupervised learning method is proposed in this study to discover the most prevalent risk profiles. The data was partitioned into discovery (70%) and validation (30%) sets. The discovery set was analyzed using the partition around medoids (PAM) method, and the stable set of risk profiles was estimated using robust consensus clustering. The PAM models' reliability was validated by predicting the risk profile of subjects from the validation set and patients admitted in November 2020. In the validation set, the clinical relevance of the risk profiles was evaluated by determining the prevalence of three patient outcomes: pneumonia diagnosis, ICU admission, or death. Six positive and five negative COVID-19 risk profiles were identified, with significant statistical differences between them. As a result, PAM clustering with consensus mapping is a viable method for discovering unsupervised risk profiles in subjects with severe respiratory health problems. |
format | Online Article Text |
id | pubmed-8351276 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-83512762021-08-09 Risk profiles for negative and positive COVID-19 hospitalized patients Nezhadmoghadam, Fahimeh Tamez-Peña, Jose Comput Biol Med Article COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The purpose of this article is to determine whether unsupervised analysis of risk factors in positive and negative COVID-19 subjects can aid in the identification of a set of reliable and clinically relevant risk profiles. Positive and negative patients hospitalized were randomly selected from the Mexican Open Registry between March and May 2020. Thirteen risk factors, three distinct outcomes, and COVID-19 test results were used to categorize registry patients. As a result, the dataset was reported via 6144 different risk profiles for each age group. The unsupervised learning method is proposed in this study to discover the most prevalent risk profiles. The data was partitioned into discovery (70%) and validation (30%) sets. The discovery set was analyzed using the partition around medoids (PAM) method, and the stable set of risk profiles was estimated using robust consensus clustering. The PAM models' reliability was validated by predicting the risk profile of subjects from the validation set and patients admitted in November 2020. In the validation set, the clinical relevance of the risk profiles was evaluated by determining the prevalence of three patient outcomes: pneumonia diagnosis, ICU admission, or death. Six positive and five negative COVID-19 risk profiles were identified, with significant statistical differences between them. As a result, PAM clustering with consensus mapping is a viable method for discovering unsupervised risk profiles in subjects with severe respiratory health problems. Elsevier Ltd. 2021-09 2021-08-09 /pmc/articles/PMC8351276/ /pubmed/34411902 http://dx.doi.org/10.1016/j.compbiomed.2021.104753 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Nezhadmoghadam, Fahimeh Tamez-Peña, Jose Risk profiles for negative and positive COVID-19 hospitalized patients |
title | Risk profiles for negative and positive COVID-19 hospitalized patients |
title_full | Risk profiles for negative and positive COVID-19 hospitalized patients |
title_fullStr | Risk profiles for negative and positive COVID-19 hospitalized patients |
title_full_unstemmed | Risk profiles for negative and positive COVID-19 hospitalized patients |
title_short | Risk profiles for negative and positive COVID-19 hospitalized patients |
title_sort | risk profiles for negative and positive covid-19 hospitalized patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351276/ https://www.ncbi.nlm.nih.gov/pubmed/34411902 http://dx.doi.org/10.1016/j.compbiomed.2021.104753 |
work_keys_str_mv | AT nezhadmoghadamfahimeh riskprofilesfornegativeandpositivecovid19hospitalizedpatients AT tamezpenajose riskprofilesfornegativeandpositivecovid19hospitalizedpatients |