Cargando…

Risk profiles for negative and positive COVID-19 hospitalized patients

COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The pur...

Descripción completa

Detalles Bibliográficos
Autores principales: Nezhadmoghadam, Fahimeh, Tamez-Peña, Jose
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351276/
https://www.ncbi.nlm.nih.gov/pubmed/34411902
http://dx.doi.org/10.1016/j.compbiomed.2021.104753
_version_ 1783735940188995584
author Nezhadmoghadam, Fahimeh
Tamez-Peña, Jose
author_facet Nezhadmoghadam, Fahimeh
Tamez-Peña, Jose
author_sort Nezhadmoghadam, Fahimeh
collection PubMed
description COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The purpose of this article is to determine whether unsupervised analysis of risk factors in positive and negative COVID-19 subjects can aid in the identification of a set of reliable and clinically relevant risk profiles. Positive and negative patients hospitalized were randomly selected from the Mexican Open Registry between March and May 2020. Thirteen risk factors, three distinct outcomes, and COVID-19 test results were used to categorize registry patients. As a result, the dataset was reported via 6144 different risk profiles for each age group. The unsupervised learning method is proposed in this study to discover the most prevalent risk profiles. The data was partitioned into discovery (70%) and validation (30%) sets. The discovery set was analyzed using the partition around medoids (PAM) method, and the stable set of risk profiles was estimated using robust consensus clustering. The PAM models' reliability was validated by predicting the risk profile of subjects from the validation set and patients admitted in November 2020. In the validation set, the clinical relevance of the risk profiles was evaluated by determining the prevalence of three patient outcomes: pneumonia diagnosis, ICU admission, or death. Six positive and five negative COVID-19 risk profiles were identified, with significant statistical differences between them. As a result, PAM clustering with consensus mapping is a viable method for discovering unsupervised risk profiles in subjects with severe respiratory health problems.
format Online
Article
Text
id pubmed-8351276
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-83512762021-08-09 Risk profiles for negative and positive COVID-19 hospitalized patients Nezhadmoghadam, Fahimeh Tamez-Peña, Jose Comput Biol Med Article COVID-19 is a viral infection that affects people differently, where the majority of cases develop mild symptoms, some people require hospitalization, and unfortunately, a small number of patients perish. Hence, identifying risk factors is critical for physicians to make treatment decisions. The purpose of this article is to determine whether unsupervised analysis of risk factors in positive and negative COVID-19 subjects can aid in the identification of a set of reliable and clinically relevant risk profiles. Positive and negative patients hospitalized were randomly selected from the Mexican Open Registry between March and May 2020. Thirteen risk factors, three distinct outcomes, and COVID-19 test results were used to categorize registry patients. As a result, the dataset was reported via 6144 different risk profiles for each age group. The unsupervised learning method is proposed in this study to discover the most prevalent risk profiles. The data was partitioned into discovery (70%) and validation (30%) sets. The discovery set was analyzed using the partition around medoids (PAM) method, and the stable set of risk profiles was estimated using robust consensus clustering. The PAM models' reliability was validated by predicting the risk profile of subjects from the validation set and patients admitted in November 2020. In the validation set, the clinical relevance of the risk profiles was evaluated by determining the prevalence of three patient outcomes: pneumonia diagnosis, ICU admission, or death. Six positive and five negative COVID-19 risk profiles were identified, with significant statistical differences between them. As a result, PAM clustering with consensus mapping is a viable method for discovering unsupervised risk profiles in subjects with severe respiratory health problems. Elsevier Ltd. 2021-09 2021-08-09 /pmc/articles/PMC8351276/ /pubmed/34411902 http://dx.doi.org/10.1016/j.compbiomed.2021.104753 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Nezhadmoghadam, Fahimeh
Tamez-Peña, Jose
Risk profiles for negative and positive COVID-19 hospitalized patients
title Risk profiles for negative and positive COVID-19 hospitalized patients
title_full Risk profiles for negative and positive COVID-19 hospitalized patients
title_fullStr Risk profiles for negative and positive COVID-19 hospitalized patients
title_full_unstemmed Risk profiles for negative and positive COVID-19 hospitalized patients
title_short Risk profiles for negative and positive COVID-19 hospitalized patients
title_sort risk profiles for negative and positive covid-19 hospitalized patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351276/
https://www.ncbi.nlm.nih.gov/pubmed/34411902
http://dx.doi.org/10.1016/j.compbiomed.2021.104753
work_keys_str_mv AT nezhadmoghadamfahimeh riskprofilesfornegativeandpositivecovid19hospitalizedpatients
AT tamezpenajose riskprofilesfornegativeandpositivecovid19hospitalizedpatients