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BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics

INTRODUCTION: Brain metastases, the most common tumors of the central nervous system, occur in approximately 20% of primary adult cancers. In particular, 40% of patients with non-small cell lung cancer develop brain metastasis. As systemic therapies for the treatment of non-small cell lung cancer be...

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Autores principales: Aghaei, Nikoo, Lam, Fred C, Kasper, Ekkehard, Venugopal, Chitra, Singh, Sheila
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351282/
http://dx.doi.org/10.1093/noajnl/vdab071.017
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author Aghaei, Nikoo
Lam, Fred C
Kasper, Ekkehard
Venugopal, Chitra
Singh, Sheila
author_facet Aghaei, Nikoo
Lam, Fred C
Kasper, Ekkehard
Venugopal, Chitra
Singh, Sheila
author_sort Aghaei, Nikoo
collection PubMed
description INTRODUCTION: Brain metastases, the most common tumors of the central nervous system, occur in approximately 20% of primary adult cancers. In particular, 40% of patients with non-small cell lung cancer develop brain metastasis. As systemic therapies for the treatment of non-small cell lung cancer become increasingly effective at controlling primary disease, patients are ironically succumbing to their brain metastases. This highlights a large unmet need to develop novel targeted therapies for the treatment of lung-to-brain metastases (LBM). We hypothesize that an in vivo functional genomic screen can identify novel genes that drive LBM. METHODS: To do this, we developed a patient-derived xenograft (PDX) mouse model of LBM using patient lung cancer cell lines. This PDX model of LBM enables the use of fluorescent and bioluminescent in vivo imaging to track the progression of lung tumor and brain metastases. RESULTS: We have performed an in vivo genome-wide CRISPR activation screening to identify novel drivers of LBM. We will derive candidate genes through mouse brain and lung tissue sequencing after mice reach endpoint. EXPECTED AREA OF FINDINGS: This platform will lead to potential therapeutic targets to prevent the formation of LBM and prolong the survival of patients with non-small cell lung cancer. LIMITATIONS: There may be limitations in getting candidate hits that overlap in all mice in our first replicate. This can be remedied by conducting the in vivo screen in at least three biological replicates. CONCLUSION: To the best of our knowledge, this is the first genome-wide in vivo CRISPR activation screen searching for drivers of LBM using a PDX animal model. This study can provide a framework to gain a deeper understanding of the regulators of BM formation which will hopefully lead to targeted drug discovery.
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spelling pubmed-83512822021-08-09 BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics Aghaei, Nikoo Lam, Fred C Kasper, Ekkehard Venugopal, Chitra Singh, Sheila Neurooncol Adv Supplement Abstracts INTRODUCTION: Brain metastases, the most common tumors of the central nervous system, occur in approximately 20% of primary adult cancers. In particular, 40% of patients with non-small cell lung cancer develop brain metastasis. As systemic therapies for the treatment of non-small cell lung cancer become increasingly effective at controlling primary disease, patients are ironically succumbing to their brain metastases. This highlights a large unmet need to develop novel targeted therapies for the treatment of lung-to-brain metastases (LBM). We hypothesize that an in vivo functional genomic screen can identify novel genes that drive LBM. METHODS: To do this, we developed a patient-derived xenograft (PDX) mouse model of LBM using patient lung cancer cell lines. This PDX model of LBM enables the use of fluorescent and bioluminescent in vivo imaging to track the progression of lung tumor and brain metastases. RESULTS: We have performed an in vivo genome-wide CRISPR activation screening to identify novel drivers of LBM. We will derive candidate genes through mouse brain and lung tissue sequencing after mice reach endpoint. EXPECTED AREA OF FINDINGS: This platform will lead to potential therapeutic targets to prevent the formation of LBM and prolong the survival of patients with non-small cell lung cancer. LIMITATIONS: There may be limitations in getting candidate hits that overlap in all mice in our first replicate. This can be remedied by conducting the in vivo screen in at least three biological replicates. CONCLUSION: To the best of our knowledge, this is the first genome-wide in vivo CRISPR activation screen searching for drivers of LBM using a PDX animal model. This study can provide a framework to gain a deeper understanding of the regulators of BM formation which will hopefully lead to targeted drug discovery. Oxford University Press 2021-08-09 /pmc/articles/PMC8351282/ http://dx.doi.org/10.1093/noajnl/vdab071.017 Text en © The Author(s) 2021. Published by Oxford University Press, the Society for Neuro-Oncology and the European Association of Neuro-Oncology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Supplement Abstracts
Aghaei, Nikoo
Lam, Fred C
Kasper, Ekkehard
Venugopal, Chitra
Singh, Sheila
BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title_full BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title_fullStr BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title_full_unstemmed BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title_short BSCI-18. Identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
title_sort bsci-18. identifying novel drivers of lung-to-brain metastasis through in vivo functional genomics
topic Supplement Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351282/
http://dx.doi.org/10.1093/noajnl/vdab071.017
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