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An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network ana...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351694/ https://www.ncbi.nlm.nih.gov/pubmed/34260414 http://dx.doi.org/10.18632/aging.203294 |
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author | Liu, Linxin Qu, Jian Dai, Yuxin Qi, Tingting Teng, Xinqi Li, Guohua Qu, Qiang |
author_facet | Liu, Linxin Qu, Jian Dai, Yuxin Qi, Tingting Teng, Xinqi Li, Guohua Qu, Qiang |
author_sort | Liu, Linxin |
collection | PubMed |
description | Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network analysis (WGCNA). Then, using the least absolute shrinkage and selection operator (Lasso) analysis, a fifteen-gene signature was firstly selected and the predictive performance for overall survival (OS) was favorable, which was identified by Receiver Operating Characteristic (ROC) curves. The risk score model was constructed based on survival-associated fifteen genes from the Lasso model, which classified MM patients into high-risk and low-risk groups. Areas under the curve (AUC) of ROC curve and log-rank test showed that the high-risk group was correlated to the dismal survival outcome of MM patients, which was also identified in testing dataset of GSE9782. The calibration plot, the AUC value of the ROC curve and Concordance-index showed that the interactive nomogram with risk score could favorably predict the probability of multi-year OS of MM patients. Therefore, it may help clinicians make a precise therapeutic decision based on the easy-to-use tool of the nomogram. |
format | Online Article Text |
id | pubmed-8351694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-83516942021-08-10 An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients Liu, Linxin Qu, Jian Dai, Yuxin Qi, Tingting Teng, Xinqi Li, Guohua Qu, Qiang Aging (Albany NY) Research Paper Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network analysis (WGCNA). Then, using the least absolute shrinkage and selection operator (Lasso) analysis, a fifteen-gene signature was firstly selected and the predictive performance for overall survival (OS) was favorable, which was identified by Receiver Operating Characteristic (ROC) curves. The risk score model was constructed based on survival-associated fifteen genes from the Lasso model, which classified MM patients into high-risk and low-risk groups. Areas under the curve (AUC) of ROC curve and log-rank test showed that the high-risk group was correlated to the dismal survival outcome of MM patients, which was also identified in testing dataset of GSE9782. The calibration plot, the AUC value of the ROC curve and Concordance-index showed that the interactive nomogram with risk score could favorably predict the probability of multi-year OS of MM patients. Therefore, it may help clinicians make a precise therapeutic decision based on the easy-to-use tool of the nomogram. Impact Journals 2021-07-14 /pmc/articles/PMC8351694/ /pubmed/34260414 http://dx.doi.org/10.18632/aging.203294 Text en Copyright: © 2021 Liu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Liu, Linxin Qu, Jian Dai, Yuxin Qi, Tingting Teng, Xinqi Li, Guohua Qu, Qiang An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title | An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title_full | An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title_fullStr | An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title_full_unstemmed | An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title_short | An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
title_sort | interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351694/ https://www.ncbi.nlm.nih.gov/pubmed/34260414 http://dx.doi.org/10.18632/aging.203294 |
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