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An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients

Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network ana...

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Autores principales: Liu, Linxin, Qu, Jian, Dai, Yuxin, Qi, Tingting, Teng, Xinqi, Li, Guohua, Qu, Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351694/
https://www.ncbi.nlm.nih.gov/pubmed/34260414
http://dx.doi.org/10.18632/aging.203294
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author Liu, Linxin
Qu, Jian
Dai, Yuxin
Qi, Tingting
Teng, Xinqi
Li, Guohua
Qu, Qiang
author_facet Liu, Linxin
Qu, Jian
Dai, Yuxin
Qi, Tingting
Teng, Xinqi
Li, Guohua
Qu, Qiang
author_sort Liu, Linxin
collection PubMed
description Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network analysis (WGCNA). Then, using the least absolute shrinkage and selection operator (Lasso) analysis, a fifteen-gene signature was firstly selected and the predictive performance for overall survival (OS) was favorable, which was identified by Receiver Operating Characteristic (ROC) curves. The risk score model was constructed based on survival-associated fifteen genes from the Lasso model, which classified MM patients into high-risk and low-risk groups. Areas under the curve (AUC) of ROC curve and log-rank test showed that the high-risk group was correlated to the dismal survival outcome of MM patients, which was also identified in testing dataset of GSE9782. The calibration plot, the AUC value of the ROC curve and Concordance-index showed that the interactive nomogram with risk score could favorably predict the probability of multi-year OS of MM patients. Therefore, it may help clinicians make a precise therapeutic decision based on the easy-to-use tool of the nomogram.
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spelling pubmed-83516942021-08-10 An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients Liu, Linxin Qu, Jian Dai, Yuxin Qi, Tingting Teng, Xinqi Li, Guohua Qu, Qiang Aging (Albany NY) Research Paper Although novel drugs and treatments have been developed and improved, multiple myeloma (MM) is still recurrent and difficult to cure. In the present study, the magenta module containing 400 hub genes was determined from the training dataset of GSE24080 through weighted gene co-expression network analysis (WGCNA). Then, using the least absolute shrinkage and selection operator (Lasso) analysis, a fifteen-gene signature was firstly selected and the predictive performance for overall survival (OS) was favorable, which was identified by Receiver Operating Characteristic (ROC) curves. The risk score model was constructed based on survival-associated fifteen genes from the Lasso model, which classified MM patients into high-risk and low-risk groups. Areas under the curve (AUC) of ROC curve and log-rank test showed that the high-risk group was correlated to the dismal survival outcome of MM patients, which was also identified in testing dataset of GSE9782. The calibration plot, the AUC value of the ROC curve and Concordance-index showed that the interactive nomogram with risk score could favorably predict the probability of multi-year OS of MM patients. Therefore, it may help clinicians make a precise therapeutic decision based on the easy-to-use tool of the nomogram. Impact Journals 2021-07-14 /pmc/articles/PMC8351694/ /pubmed/34260414 http://dx.doi.org/10.18632/aging.203294 Text en Copyright: © 2021 Liu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Liu, Linxin
Qu, Jian
Dai, Yuxin
Qi, Tingting
Teng, Xinqi
Li, Guohua
Qu, Qiang
An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title_full An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title_fullStr An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title_full_unstemmed An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title_short An interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
title_sort interactive nomogram based on clinical and molecular signatures to predict prognosis in multiple myeloma patients
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351694/
https://www.ncbi.nlm.nih.gov/pubmed/34260414
http://dx.doi.org/10.18632/aging.203294
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