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Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor r...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351707/ https://www.ncbi.nlm.nih.gov/pubmed/34285143 http://dx.doi.org/10.18632/aging.203322 |
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author | Hao, Fengjie Wang, Nan Wang, Xiang Chen, Yongjun Wang, Junqing |
author_facet | Hao, Fengjie Wang, Nan Wang, Xiang Chen, Yongjun Wang, Junqing |
author_sort | Hao, Fengjie |
collection | PubMed |
description | Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor recurrence for HCC. Based on public database, lncRNA-based classifiers for overall survival and tumor recurrence were built with regression analysis and cross validation strategy. According to the risk-score of the classifiers, the whole cohorts were divided into groups with high and low risk. Afterwards, the efficiency of the lncRNA-based classifiers was evaluated and compared with other clinical factors. Finally, candidate small molecules for high risk groups were further screened using drug response databases to explore potential drugs for HCC treatment. |
format | Online Article Text |
id | pubmed-8351707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-83517072021-08-10 Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma Hao, Fengjie Wang, Nan Wang, Xiang Chen, Yongjun Wang, Junqing Aging (Albany NY) Research Paper Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor recurrence for HCC. Based on public database, lncRNA-based classifiers for overall survival and tumor recurrence were built with regression analysis and cross validation strategy. According to the risk-score of the classifiers, the whole cohorts were divided into groups with high and low risk. Afterwards, the efficiency of the lncRNA-based classifiers was evaluated and compared with other clinical factors. Finally, candidate small molecules for high risk groups were further screened using drug response databases to explore potential drugs for HCC treatment. Impact Journals 2021-07-20 /pmc/articles/PMC8351707/ /pubmed/34285143 http://dx.doi.org/10.18632/aging.203322 Text en Copyright: © 2021 Hao et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Hao, Fengjie Wang, Nan Wang, Xiang Chen, Yongjun Wang, Junqing Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title | Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title_full | Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title_fullStr | Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title_full_unstemmed | Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title_short | Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma |
title_sort | identification of prognostic long non-coding rna signature with potential drugs in hepatocellular carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351707/ https://www.ncbi.nlm.nih.gov/pubmed/34285143 http://dx.doi.org/10.18632/aging.203322 |
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