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Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma

Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor r...

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Detalles Bibliográficos
Autores principales: Hao, Fengjie, Wang, Nan, Wang, Xiang, Chen, Yongjun, Wang, Junqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351707/
https://www.ncbi.nlm.nih.gov/pubmed/34285143
http://dx.doi.org/10.18632/aging.203322
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author Hao, Fengjie
Wang, Nan
Wang, Xiang
Chen, Yongjun
Wang, Junqing
author_facet Hao, Fengjie
Wang, Nan
Wang, Xiang
Chen, Yongjun
Wang, Junqing
author_sort Hao, Fengjie
collection PubMed
description Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor recurrence for HCC. Based on public database, lncRNA-based classifiers for overall survival and tumor recurrence were built with regression analysis and cross validation strategy. According to the risk-score of the classifiers, the whole cohorts were divided into groups with high and low risk. Afterwards, the efficiency of the lncRNA-based classifiers was evaluated and compared with other clinical factors. Finally, candidate small molecules for high risk groups were further screened using drug response databases to explore potential drugs for HCC treatment.
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spelling pubmed-83517072021-08-10 Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma Hao, Fengjie Wang, Nan Wang, Xiang Chen, Yongjun Wang, Junqing Aging (Albany NY) Research Paper Hepatocellular carcinoma (HCC) is the primary malignancy in the liver with high rate of death and recurrence. Novel prognostic model would be crucial for early diagnosis and improved clinical decision. The study aims to provide an effective lncRNA-based signature to predict survival time and tumor recurrence for HCC. Based on public database, lncRNA-based classifiers for overall survival and tumor recurrence were built with regression analysis and cross validation strategy. According to the risk-score of the classifiers, the whole cohorts were divided into groups with high and low risk. Afterwards, the efficiency of the lncRNA-based classifiers was evaluated and compared with other clinical factors. Finally, candidate small molecules for high risk groups were further screened using drug response databases to explore potential drugs for HCC treatment. Impact Journals 2021-07-20 /pmc/articles/PMC8351707/ /pubmed/34285143 http://dx.doi.org/10.18632/aging.203322 Text en Copyright: © 2021 Hao et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Hao, Fengjie
Wang, Nan
Wang, Xiang
Chen, Yongjun
Wang, Junqing
Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title_full Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title_fullStr Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title_full_unstemmed Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title_short Identification of prognostic long non-coding RNA signature with potential drugs in hepatocellular carcinoma
title_sort identification of prognostic long non-coding rna signature with potential drugs in hepatocellular carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8351707/
https://www.ncbi.nlm.nih.gov/pubmed/34285143
http://dx.doi.org/10.18632/aging.203322
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