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ARBitR: an overlap-aware genome assembly scaffolder for linked reads

SUMMARY: Linked genomic sequencing reads contain information that can be used to join sequences together into scaffolds in draft genome assemblies. Existing software for this purpose performs the scaffolding by joining sequences with a gap between them, not considering potential overlaps of contigs....

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Detalles Bibliográficos
Autores principales: Hiltunen, Markus, Ryberg, Martin, Johannesson, Hanna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352505/
https://www.ncbi.nlm.nih.gov/pubmed/33216122
http://dx.doi.org/10.1093/bioinformatics/btaa975