Cargando…
Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking
BACKGROUND: Colorectal cancer (CRC) is one of the most common gastrointestinal tumors, which accounts for approximately 10% of all diagnosed cancers and cancer deaths worldwide per year. Scutellariae barbatae Herba (SBH) is one of the most frequently used traditional Chinese medicine (TCM) in the tr...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352706/ https://www.ncbi.nlm.nih.gov/pubmed/34381520 http://dx.doi.org/10.1155/2021/3905367 |
_version_ | 1783736242019500032 |
---|---|
author | Qi, Xiangjun Xu, Hongbin Zhang, Peng Chen, Guoming Chen, Zhiqiang Fang, Caishan Lin, Lizhu |
author_facet | Qi, Xiangjun Xu, Hongbin Zhang, Peng Chen, Guoming Chen, Zhiqiang Fang, Caishan Lin, Lizhu |
author_sort | Qi, Xiangjun |
collection | PubMed |
description | BACKGROUND: Colorectal cancer (CRC) is one of the most common gastrointestinal tumors, which accounts for approximately 10% of all diagnosed cancers and cancer deaths worldwide per year. Scutellariae barbatae Herba (SBH) is one of the most frequently used traditional Chinese medicine (TCM) in the treatment of CRC. Although many experiments have been carried out to explain the mechanisms of SBH, the mechanisms of SBH have not been illuminated fully. Thus, we constructed a network pharmacology and molecular docking to investigate the mechanisms of SBH. METHODS: We adopted active constituent prescreening, target predicting, protein-protein interaction (PPI) analysis, Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, differentially expressed gene analysis, and molecular docking to establish a system pharmacology database of SBH against CRC. RESULTS: A total of 64 active constituents of SBH were obtained and 377 targets were predicted, and the result indicated that quercetin, luteolin, wogonin, and apigenin were the main active constituents of SBH. Glucocorticoid receptor (NR3C1), pPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (PIK3CA), cellular tumor antigen p53 (TP53), transcription factor AP-1 (JUN), mitogen-activated protein kinase 1 (MAPK1), Myc protooncogene protein (MYC), cyclin-dependent kinase 1 (CDK1), and broad substrate specificity ATP-binding cassette transporter ABCG2 (ABCG2) were the major targets of SBH in the treatment of CRC. GO analysis illustrated that the core biological process regulated by SBH was the regulation of the cell cycle. Thirty pathways were presented and 8 pathways related to CRC were involved. Molecular docking presented the binding details of 3 key targets with 6 active constituents. CONCLUSIONS: The mechanisms of SBH against CRC depend on the synergistic effect of multiple active constituents, multiple targets, and multiple pathways. |
format | Online Article Text |
id | pubmed-8352706 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-83527062021-08-10 Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking Qi, Xiangjun Xu, Hongbin Zhang, Peng Chen, Guoming Chen, Zhiqiang Fang, Caishan Lin, Lizhu Evid Based Complement Alternat Med Research Article BACKGROUND: Colorectal cancer (CRC) is one of the most common gastrointestinal tumors, which accounts for approximately 10% of all diagnosed cancers and cancer deaths worldwide per year. Scutellariae barbatae Herba (SBH) is one of the most frequently used traditional Chinese medicine (TCM) in the treatment of CRC. Although many experiments have been carried out to explain the mechanisms of SBH, the mechanisms of SBH have not been illuminated fully. Thus, we constructed a network pharmacology and molecular docking to investigate the mechanisms of SBH. METHODS: We adopted active constituent prescreening, target predicting, protein-protein interaction (PPI) analysis, Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, differentially expressed gene analysis, and molecular docking to establish a system pharmacology database of SBH against CRC. RESULTS: A total of 64 active constituents of SBH were obtained and 377 targets were predicted, and the result indicated that quercetin, luteolin, wogonin, and apigenin were the main active constituents of SBH. Glucocorticoid receptor (NR3C1), pPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (PIK3CA), cellular tumor antigen p53 (TP53), transcription factor AP-1 (JUN), mitogen-activated protein kinase 1 (MAPK1), Myc protooncogene protein (MYC), cyclin-dependent kinase 1 (CDK1), and broad substrate specificity ATP-binding cassette transporter ABCG2 (ABCG2) were the major targets of SBH in the treatment of CRC. GO analysis illustrated that the core biological process regulated by SBH was the regulation of the cell cycle. Thirty pathways were presented and 8 pathways related to CRC were involved. Molecular docking presented the binding details of 3 key targets with 6 active constituents. CONCLUSIONS: The mechanisms of SBH against CRC depend on the synergistic effect of multiple active constituents, multiple targets, and multiple pathways. Hindawi 2021-08-02 /pmc/articles/PMC8352706/ /pubmed/34381520 http://dx.doi.org/10.1155/2021/3905367 Text en Copyright © 2021 Xiangjun Qi et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Qi, Xiangjun Xu, Hongbin Zhang, Peng Chen, Guoming Chen, Zhiqiang Fang, Caishan Lin, Lizhu Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title | Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title_full | Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title_fullStr | Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title_full_unstemmed | Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title_short | Investigating the Mechanism of Scutellariae barbata Herba in the Treatment of Colorectal Cancer by Network Pharmacology and Molecular Docking |
title_sort | investigating the mechanism of scutellariae barbata herba in the treatment of colorectal cancer by network pharmacology and molecular docking |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352706/ https://www.ncbi.nlm.nih.gov/pubmed/34381520 http://dx.doi.org/10.1155/2021/3905367 |
work_keys_str_mv | AT qixiangjun investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT xuhongbin investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT zhangpeng investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT chenguoming investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT chenzhiqiang investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT fangcaishan investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking AT linlizhu investigatingthemechanismofscutellariaebarbataherbainthetreatmentofcolorectalcancerbynetworkpharmacologyandmoleculardocking |