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Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels

In recent years, PCR-based methods as a rapid and high accurate technique in the industry and medical fields have been expanded rapidly. Where we are faced with the COVID-19 pandemic, the necessity of a rapid diagnosis has felt more than ever. In the current interdisciplinary study, we have proposed...

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Autores principales: Alihosseini, Yousef, Azaddel, Mohammad Reza, Moslemi, Sahel, Mohammadi, Mehdi, Pormohammad, Ali, Targhi, Mohammad Zabetian, Heyhat, Mohammad Mahdi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352922/
https://www.ncbi.nlm.nih.gov/pubmed/34373493
http://dx.doi.org/10.1038/s41598-021-95446-0
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author Alihosseini, Yousef
Azaddel, Mohammad Reza
Moslemi, Sahel
Mohammadi, Mehdi
Pormohammad, Ali
Targhi, Mohammad Zabetian
Heyhat, Mohammad Mahdi
author_facet Alihosseini, Yousef
Azaddel, Mohammad Reza
Moslemi, Sahel
Mohammadi, Mehdi
Pormohammad, Ali
Targhi, Mohammad Zabetian
Heyhat, Mohammad Mahdi
author_sort Alihosseini, Yousef
collection PubMed
description In recent years, PCR-based methods as a rapid and high accurate technique in the industry and medical fields have been expanded rapidly. Where we are faced with the COVID-19 pandemic, the necessity of a rapid diagnosis has felt more than ever. In the current interdisciplinary study, we have proposed, developed, and characterized a state-of-the-art liquid cooling design to accelerate the PCR procedure. A numerical simulation approach is utilized to evaluate 15 different cross-sections of the microchannel heat sink and select the best shape to achieve this goal. Also, crucial heat sink parameters are characterized, e.g., heat transfer coefficient, pressure drop, performance evaluation criteria, and fluid flow. The achieved result showed that the circular cross-section is the most efficient shape for the microchannel heat sink, which has a maximum heat transfer enhancement of 25% compared to the square shape at the Reynolds number of 1150. In the next phase of the study, the circular cross-section microchannel is located below the PCR device to evaluate the cooling rate of the PCR. Also, the results demonstrate that it takes 16.5 s to cool saliva samples in the PCR well, which saves up to 157.5 s for the whole amplification procedure compared to the conventional air fans. Another advantage of using the microchannel heat sink is that it takes up a little space compared to other common cooling methods.
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spelling pubmed-83529222021-08-11 Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels Alihosseini, Yousef Azaddel, Mohammad Reza Moslemi, Sahel Mohammadi, Mehdi Pormohammad, Ali Targhi, Mohammad Zabetian Heyhat, Mohammad Mahdi Sci Rep Article In recent years, PCR-based methods as a rapid and high accurate technique in the industry and medical fields have been expanded rapidly. Where we are faced with the COVID-19 pandemic, the necessity of a rapid diagnosis has felt more than ever. In the current interdisciplinary study, we have proposed, developed, and characterized a state-of-the-art liquid cooling design to accelerate the PCR procedure. A numerical simulation approach is utilized to evaluate 15 different cross-sections of the microchannel heat sink and select the best shape to achieve this goal. Also, crucial heat sink parameters are characterized, e.g., heat transfer coefficient, pressure drop, performance evaluation criteria, and fluid flow. The achieved result showed that the circular cross-section is the most efficient shape for the microchannel heat sink, which has a maximum heat transfer enhancement of 25% compared to the square shape at the Reynolds number of 1150. In the next phase of the study, the circular cross-section microchannel is located below the PCR device to evaluate the cooling rate of the PCR. Also, the results demonstrate that it takes 16.5 s to cool saliva samples in the PCR well, which saves up to 157.5 s for the whole amplification procedure compared to the conventional air fans. Another advantage of using the microchannel heat sink is that it takes up a little space compared to other common cooling methods. Nature Publishing Group UK 2021-08-09 /pmc/articles/PMC8352922/ /pubmed/34373493 http://dx.doi.org/10.1038/s41598-021-95446-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Alihosseini, Yousef
Azaddel, Mohammad Reza
Moslemi, Sahel
Mohammadi, Mehdi
Pormohammad, Ali
Targhi, Mohammad Zabetian
Heyhat, Mohammad Mahdi
Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title_full Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title_fullStr Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title_full_unstemmed Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title_short Effect of liquid cooling on PCR performance with the parametric study of cross-section shapes of microchannels
title_sort effect of liquid cooling on pcr performance with the parametric study of cross-section shapes of microchannels
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352922/
https://www.ncbi.nlm.nih.gov/pubmed/34373493
http://dx.doi.org/10.1038/s41598-021-95446-0
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