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Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+))
Heavy metal Cadmium (Cd(2+)) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases responding...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352946/ https://www.ncbi.nlm.nih.gov/pubmed/34373575 http://dx.doi.org/10.1038/s41598-021-95709-w |
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author | Liu, Xue Jiang, Hucheng Ye, Baoqing Qian, Hongli Guo, Ziqi Bai, Haotian Gong, Jinhua Feng, Jianbin Ma, Keyi |
author_facet | Liu, Xue Jiang, Hucheng Ye, Baoqing Qian, Hongli Guo, Ziqi Bai, Haotian Gong, Jinhua Feng, Jianbin Ma, Keyi |
author_sort | Liu, Xue |
collection | PubMed |
description | Heavy metal Cadmium (Cd(2+)) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases responding to Cd(2+) stress at a molecular level. In this study, transcriptomic analysis was applied to characterize gene expression profiles of gills and hepatopancreas of M. rosenbergill after Cd(2+) exposure for 0 h, 3 h and 3 d. Six cDNA libraries (Gi 0 h, Gi 3 h, Gi 3 d, Hp 0 h, Hp 3 h, and Hp 3 d) were constructed and a total of 66,676 transcripts and 48,991 unigenes were annotated. Furthermore, differentially expressed genes (DEGs) were isolated by comparing the Cd(2+) treated time-point libraries (3 h and 3 d group) with the control library (0 h group). The results showed that most of the DEGs were down-regulated after Cd(2+) exposure and the number of DEGs among gill groups were significantly higher than those among hepatopancreas groups. GO functional and KEGG pathway analysis suggested many key DEGs in response to the Cd(2+) stress, such as metallothionein and Hemocyanin. Additionally, a total of six DEGs were randomly selected to further identify their expressional profile by qPCR. The results indicated that these DEGs were involved in the response to Cd(2+). This comparative transcriptome provides valuable molecular information on the mechanisms of responding to Cd(2+) stress in M. rosenbergii, which lays the foundation for further understanding of heavy metal stress. |
format | Online Article Text |
id | pubmed-8352946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-83529462021-08-11 Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) Liu, Xue Jiang, Hucheng Ye, Baoqing Qian, Hongli Guo, Ziqi Bai, Haotian Gong, Jinhua Feng, Jianbin Ma, Keyi Sci Rep Article Heavy metal Cadmium (Cd(2+)) pollution has become a severe environmental problem for aquatic organisms. In crustaceans, gills (Gi) and hepatopancreas (Hp) play a vital role in the toxicology. However, in Macrobrachium rosenbergill, there are few researches about gill and hepatopancreases responding to Cd(2+) stress at a molecular level. In this study, transcriptomic analysis was applied to characterize gene expression profiles of gills and hepatopancreas of M. rosenbergill after Cd(2+) exposure for 0 h, 3 h and 3 d. Six cDNA libraries (Gi 0 h, Gi 3 h, Gi 3 d, Hp 0 h, Hp 3 h, and Hp 3 d) were constructed and a total of 66,676 transcripts and 48,991 unigenes were annotated. Furthermore, differentially expressed genes (DEGs) were isolated by comparing the Cd(2+) treated time-point libraries (3 h and 3 d group) with the control library (0 h group). The results showed that most of the DEGs were down-regulated after Cd(2+) exposure and the number of DEGs among gill groups were significantly higher than those among hepatopancreas groups. GO functional and KEGG pathway analysis suggested many key DEGs in response to the Cd(2+) stress, such as metallothionein and Hemocyanin. Additionally, a total of six DEGs were randomly selected to further identify their expressional profile by qPCR. The results indicated that these DEGs were involved in the response to Cd(2+). This comparative transcriptome provides valuable molecular information on the mechanisms of responding to Cd(2+) stress in M. rosenbergii, which lays the foundation for further understanding of heavy metal stress. Nature Publishing Group UK 2021-08-09 /pmc/articles/PMC8352946/ /pubmed/34373575 http://dx.doi.org/10.1038/s41598-021-95709-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Liu, Xue Jiang, Hucheng Ye, Baoqing Qian, Hongli Guo, Ziqi Bai, Haotian Gong, Jinhua Feng, Jianbin Ma, Keyi Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title | Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title_full | Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title_fullStr | Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title_full_unstemmed | Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title_short | Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd(2+)) |
title_sort | comparative transcriptome analysis of the gills and hepatopancreas from macrobrachium rosenbergii exposed to the heavy metal cadmium (cd(2+)) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8352946/ https://www.ncbi.nlm.nih.gov/pubmed/34373575 http://dx.doi.org/10.1038/s41598-021-95709-w |
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