Cargando…

Evaluation of the added value of viral genomic information for predicting severity of influenza infection

BACKGROUND: The severity of an influenza infection is influenced by both host and viral characteristics. This study aims to assess the relevance of viral genomic data for the prediction of severe influenza A(H3N2) infections among patients hospitalized for severe acute respiratory infection (SARI),...

Descripción completa

Detalles Bibliográficos
Autores principales:	Van Goethem, Nina, Robert, Annie, Bossuyt, Nathalie, Van Poelvoorde, Laura A. E., Quoilin, Sophie, De Keersmaecker, Sigrid C. J., Devleesschauwer, Brecht, Thomas, Isabelle, Vanneste, Kevin, Roosens, Nancy H. C., Van Oyen, Herman
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8353062/ https://www.ncbi.nlm.nih.gov/pubmed/34376182 http://dx.doi.org/10.1186/s12879-021-06510-z

Ejemplares similares

Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance
por: Van Poelvoorde, Laura, et al.
Publicado: (2022)

A systematic review and meta-analysis of host genetic factors associated with influenza severity
por: Van Goethem, Nina, et al.
Publicado: (2021)

Whole-genome-based phylogenomic analysis of the Belgian 2016–2017 influenza A(H3N2) outbreak season allows improved surveillance
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2021)

Status and potential of bacterial genomics for public health practice: a scoping review
por: Van Goethem, Nina, et al.
Publicado: (2019)

Perceived utility and feasibility of pathogen genomics for public health practice: a survey among public health professionals working in the field of infectious diseases, Belgium, 2019
por: Van Goethem, N., et al.
Publicado: (2020)

A general approach to identify low-frequency variants within influenza samples collected during routine surveillance
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2022)

Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2021)

Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection
por: Gand, Mathieu, et al.
Publicado: (2020)

Deepening of In Silico Evaluation of SARS-CoV-2 Detection RT-qPCR Assays in the Context of New Variants
por: Gand, Mathieu, et al.
Publicado: (2021)

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks
por: Nouws, Stéphanie, et al.
Publicado: (2021)

Strategy to Develop and Evaluate a Multiplex RT-ddPCR in Response to SARS-CoV-2 Genomic Evolution
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2021)

Detection and identification of authorized and unauthorized GMOs using high-throughput sequencing with the support of a sequence-based GMO database
por: Saltykova, Assia, et al.
Publicado: (2022)

Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteria
por: Gand, Mathieu, et al.
Publicado: (2023)

Coverage of the national surveillance system for human Salmonella infections, Belgium, 2016-2020
por: Van Goethem, Nina, et al.
Publicado: (2021)

Development of Digital Droplet PCR Targeting the Influenza H3N2 Oseltamivir-Resistant E119V Mutation and Its Performance through the Use of Reverse Genetics Mutants
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2023)

Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance
por: Bloemen, Bram, et al.
Publicado: (2023)

Evolution of educational inequalities in life and health expectancies at 25 years in Belgium between 2001 and 2011: a census-based study
por: Renard, Françoise, et al.
Publicado: (2019)

Evaluation of WGS performance for bacterial pathogen characterization with the Illumina technology optimized for time-critical situations
por: Bogaerts, Bert, et al.
Publicado: (2021)

Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing
por: Fraiture, Marie-Alice, et al.
Publicado: (2020)

Characterization of Genetically Modified Microorganisms Using Short- and Long-Read Whole-Genome Sequencing Reveals Contaminations of Related Origin in Multiple Commercial Food Enzyme Products
por: D’aes, Jolien, et al.
Publicado: (2021)

Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium
por: Berbers, Bas, et al.
Publicado: (2023)

Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B(2) products sold on the Belgian market using whole-genome sequencing
por: Bogaerts, Bert, et al.
Publicado: (2023)

Rapid establishment of a national surveillance of COVID-19 hospitalizations in Belgium
por: Van Goethem, Nina, et al.
Publicado: (2020)

Correction to: Rapid establishment of a national surveillance of COVID-19 hospitalizations in Belgium
por: Van Goethem, Nina, et al.
Publicado: (2021)

Case Report: Multidrug Resistant Raoultella ornithinolytica in a Septicemic Calf
por: Pas, Mathilde L., et al.
Publicado: (2021)

Shifting national surveillance of Shigella infections toward geno‐serotyping by the development of a tailored Luminex assay and NGS workflow
por: Ventola, Eleonora, et al.
Publicado: (2019)

Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination
por: Berbers, Bas, et al.
Publicado: (2020)

Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products
por: D’aes, Jolien, et al.
Publicado: (2022)

Changes in quality-adjusted life expectancy in Belgium, 2013 and 2018
por: Scohy, Aline, et al.
Publicado: (2022)

Intake of Fat-Soluble Vitamins in the Belgian Population: Adequacy and Contribution of Foods, Fortified Foods and Supplements
por: Moyersoen, Isabelle, et al.
Publicado: (2017)

Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation
por: Bogaerts, Bert, et al.
Publicado: (2021)

Targeting the 16S rRNA Gene for Bacterial Identification in Complex Mixed Samples: Comparative Evaluation of Second (Illumina) and Third (Oxford Nanopore Technologies) Generation Sequencing Technologies
por: Winand, Raf, et al.
Publicado: (2019)

Isolation of Drug-Resistant Gallibacterium anatis from Calves with Unresponsive Bronchopneumonia, Belgium
por: Van Driessche, Laura, et al.
Publicado: (2020)

The genetic structure of the Belgian population
por: Van den Eynden, Jimmy, et al.
Publicado: (2018)

Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: Neisseria meningitidis as a Proof-of-Concept
por: Bogaerts, Bert, et al.
Publicado: (2019)

Nanopore sequencing technology: a new route for the fast detection of unauthorized GMO
por: Fraiture, Marie-Alice, et al.
Publicado: (2018)

The association between area deprivation and COVID-19 incidence: a municipality-level spatio-temporal study in Belgium, 2020–2021
por: Meurisse, Marjan, et al.
Publicado: (2022)

Correction to: The association between area deprivation and COVID-19 incidence: a municipality-level spatio-temporal study in Belgium, 2020–2021
por: Meurisse, Marjan, et al.
Publicado: (2022)

Development of a Droplet Digital PCR to Monitor SARS-CoV-2 Omicron Variant BA.2 in Wastewater Samples
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2023)

A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
por: Buytaers, Florence E., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_fm8neaamcf0cbehf4g707ut872