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The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae

Rhododendron mole (Blume) G. Don is an attractive ornamental and valuable medicinal plant which widely distributed in the southern regions of China. In order to promote the studies on the genetic diversity of this species, we assembled the complete chloroplast (cp) genome of R. molle by using the ge...

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Autores principales: Liu, Yan, Li, Qiaoyun, Wang, Ling, Wu, Linshi, Huang, Yaqi, Zhang, Juan, Song, Yin, Liao, Juyang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8354172/
https://www.ncbi.nlm.nih.gov/pubmed/34395886
http://dx.doi.org/10.1080/23802359.2021.1959458
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author Liu, Yan
Li, Qiaoyun
Wang, Ling
Wu, Linshi
Huang, Yaqi
Zhang, Juan
Song, Yin
Liao, Juyang
author_facet Liu, Yan
Li, Qiaoyun
Wang, Ling
Wu, Linshi
Huang, Yaqi
Zhang, Juan
Song, Yin
Liao, Juyang
author_sort Liu, Yan
collection PubMed
description Rhododendron mole (Blume) G. Don is an attractive ornamental and valuable medicinal plant which widely distributed in the southern regions of China. In order to promote the studies on the genetic diversity of this species, we assembled the complete chloroplast (cp) genome of R. molle by using the genome skimming approach. The results showed that the cp genome of R. molle exhibited a quadripartite cycle with 197,877 bp, comprising of two inverted repeats (IRs) of 43,831 bp separated by a large single copy (LSC) region of 110,189 bp and a quite small single copy (SSC) region of 26 bp. It encodes 146 genes, including 92 protein-coding, 46 tRNA, and eight rRNA genes. The overall GC content of the cp genome was 36.0%. The phylogenetic analysis indicated that R. molle is closely related to R. delavayi. Thus, the cp genome sequence of R. molle provides a rich source of genetic information for studies on Rhododendron taxonomy, phylogeny, and evolution, as well as lays the foundation for further development and utilization of R. molle.
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spelling pubmed-83541722021-08-13 The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae Liu, Yan Li, Qiaoyun Wang, Ling Wu, Linshi Huang, Yaqi Zhang, Juan Song, Yin Liao, Juyang Mitochondrial DNA B Resour Mitogenome Announcement Rhododendron mole (Blume) G. Don is an attractive ornamental and valuable medicinal plant which widely distributed in the southern regions of China. In order to promote the studies on the genetic diversity of this species, we assembled the complete chloroplast (cp) genome of R. molle by using the genome skimming approach. The results showed that the cp genome of R. molle exhibited a quadripartite cycle with 197,877 bp, comprising of two inverted repeats (IRs) of 43,831 bp separated by a large single copy (LSC) region of 110,189 bp and a quite small single copy (SSC) region of 26 bp. It encodes 146 genes, including 92 protein-coding, 46 tRNA, and eight rRNA genes. The overall GC content of the cp genome was 36.0%. The phylogenetic analysis indicated that R. molle is closely related to R. delavayi. Thus, the cp genome sequence of R. molle provides a rich source of genetic information for studies on Rhododendron taxonomy, phylogeny, and evolution, as well as lays the foundation for further development and utilization of R. molle. Taylor & Francis 2021-08-09 /pmc/articles/PMC8354172/ /pubmed/34395886 http://dx.doi.org/10.1080/23802359.2021.1959458 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Yan
Li, Qiaoyun
Wang, Ling
Wu, Linshi
Huang, Yaqi
Zhang, Juan
Song, Yin
Liao, Juyang
The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title_full The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title_fullStr The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title_full_unstemmed The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title_short The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
title_sort complete chloroplast genome of rhododendron molle and its phylogenetic position within ericaceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8354172/
https://www.ncbi.nlm.nih.gov/pubmed/34395886
http://dx.doi.org/10.1080/23802359.2021.1959458
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