Cargando…

High-Quality Genome Reconstruction of Candida albicans CHN1 Using Nanopore and Illumina Sequencing and Hybrid Assembly

We report an improved, nearly closed, high-quality draft genome reconstruction of the Candida albicans CHN1 strain (ATCC MYA-4779), a human isolate, using Illumina and Nanopore sequencing. Covering six complete and two partial nuclear chromosomes along with a partial mitochondrial genome, this assem...

Descripción completa

Detalles Bibliográficos
Autores principales:	Garg, Shipra, Ranjan, Piyush, Erb-Downward, John R., Huffnagle, Gary B.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2021
Materias:	Genome Sequences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8354536/ https://www.ncbi.nlm.nih.gov/pubmed/34110235 http://dx.doi.org/10.1128/MRA.00299-21

Ejemplares similares

Hybrid Nanopore-Illumina Assemblies for Five Extraintestinal Pathogenic Escherichia coli Isolates
por: Mattrasingh, D., et al.
Publicado: (2021)

Hybrid Nanopore-Illumina Genome Assembly of a Drosophila suzukii Gut Bacterial Symbiont, Gluconobacter cerinus FLW-1
por: Shu, Runhang, et al.
Publicado: (2021)

Complete Genome Sequences of Three Ornithobacterium rhinotracheale Strains from Avian Sources, Using Hybrid Nanopore-Illumina Assembly
por: Hashish, Amro, et al.
Publicado: (2023)

Complete Genome Sequences of Walnut-Associated Xanthomonas euroxanthea Strains CPBF 367 and CPBF 426 Obtained by Illumina/Nanopore Hybrid Assembly
por: Teixeira, Miguel, et al.
Publicado: (2020)

Complete Circular Genome Sequence of a Multidrug-Resistant Escherichia coli Strain from Cuba Obtained with Nanopore and Illumina Hybrid Assembly
por: Hernández-Fillor, Rosa Elena, et al.
Publicado: (2019)

Complete Closed Genome Sequence of the Inulin-Utilizing Lactiplantibacillus plantarum Strain Lp900, Obtained Using a Hybrid Nanopore and Illumina Assembly
por: Fuhren, Jori, et al.
Publicado: (2021)

Draft Genome Sequence of Fusarium oxysporum f. sp. cubense Tropical Race 4 from Peru, Obtained by Nanopore and Illumina Hybrid Assembly
por: Leiva, Ana M., et al.
Publicado: (2022)

Complete Genome Sequences of Pseudomonas lundensis Strains M101 and M105, Isolated from 1% Pasteurized Milk
por: Ravi, Keerthikka, et al.
Publicado: (2021)

Complete Genome Assemblies of the Rare Salmonella enterica Serovar Adjame Using Nanopore and Illumina Sequence Reads
por: Gao, Ruimin, et al.
Publicado: (2020)

Complete Genome Sequence Obtained by Nanopore and Illumina Hybrid Assembly of Xanthomonas arboricola pv. juglandis CPBF 427, Isolated from Buds of a Walnut Tree
por: Teixeira, Miguel, et al.
Publicado: (2021)

De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
por: Ogiso-Tanaka, Eri, et al.
Publicado: (2022)

Complete genome sequences generated using hybrid Nanopore-Illumina assembly of two non-typical Avibacterium paragallinarum strains isolated from clinically normal chicken flocks
por: Hashish, Amro, et al.
Publicado: (2023)

Closed Genome Sequence Obtained Using Hybrid Nanopore/Illumina Assembly of a Bacillus anthracis Isolate from an Animal-Skin-Drum-Associated Anthrax Case in the United Kingdom
por: Pullan, Steven T., et al.
Publicado: (2018)

Complete Genome Sequence of Clostridioides difficile Ribotype 255 Strain Mta-79, Assembled Using Oxford Nanopore and Illumina Sequencing
por: Spinler, Jennifer K., et al.
Publicado: (2019)

Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
por: Llanes, Alejandro, et al.
Publicado: (2020)

Complete Genome Sequence of Mycobacterium xenopi JCM15661(T), Obtained Using Nanopore and Illumina Sequencing Technologies
por: Yoshida, Mitsunori, et al.
Publicado: (2020)

Complete Genome Sequence of Caulobacter sp. Strain S6, Obtained Using Oxford Nanopore and Illumina Sequencing
por: Zhang, Cuiyang, et al.
Publicado: (2021)

Closed Genome Sequences of Clinical Neisseria gonorrhoeae Strains Obtained from Combined Oxford Nanopore and Illumina Sequencing
por: White, Richard C., et al.
Publicado: (2019)

Modulation of Post-Antibiotic Bacterial Community Reassembly and Host Response by Candida albicans
por: Erb Downward, John R., et al.
Publicado: (2013)

Complete Genome Sequence of Paradevosia shaoguanensis Type Strain J5-3, Obtained Using Nanopore and Illumina Sequencing Technologies
por: Wang, Yang, et al.
Publicado: (2021)

Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
por: Spinler, Jennifer K., et al.
Publicado: (2019)

Genome Sequence for Candida albicans Clinical Oral Isolate 529L
por: Cuomo, Christina A., et al.
Publicado: (2019)

Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
por: Bouchez, Valérie, et al.
Publicado: (2018)

Complete Genome Sequence of Campylobacter armoricus CA639, Which Carries Two Plasmids, Compiled Using Oxford Nanopore and Illumina Sequencing Technologies
por: Boukerb, Amine M., et al.
Publicado: (2020)

Draft Genome Sequences of Six Strains Isolated from the InSight Spacecraft and Associated Surfaces Using Oxford Nanopore- and Illumina-Based Sequencing
por: Vera, Daniel L., et al.
Publicado: (2020)

Nanopore Hybrid Assembly of Biscogniauxia mediterranea Isolated from Quercus cerris Affected by Charcoal Disease in an Endangered Coastal Wood
por: Beccaccioli, Marzia, et al.
Publicado: (2021)

Genome Sequencing of Sub-Arctic Mesomycetozoean Sphaeroforma sirkka Strain B5, Performed with the Oxford Nanopore minION and Illumina HiSeq Systems
por: Ducluzeau, A.-L., et al.
Publicado: (2018)

Highly Contiguous Nanopore Genome Assembly of Chlamydomonas reinhardtii CC-1690
por: O’Donnell, Samuel, et al.
Publicado: (2020)

Complete Genome Sequence of Tetracycline-Resistant Serratia liquefaciens S1, Isolated from Mixed Greens, Obtained Using Illumina MiSeq and Oxford Nanopore MinION Sequencing
por: Stein, Maria, et al.
Publicado: (2020)

Chromosome-Level Genome Assembly of the Yeast Candida verbasci
por: Brejová, Broňa, et al.
Publicado: (2023)

Complete Reference Genome Sequence of the Extensively Drug-Resistant Strain Neisseria gonorrhoeae AT159, with Ceftriaxone Resistance and High-Level Azithromycin Resistance, Using Nanopore Q20+ Chemistry and Illumina Sequencing
por: Golparian, Daniel, et al.
Publicado: (2022)

Draft Genome Sequence of a Diploid and Hybrid Candida Strain, Candida sanyaensis UCD423, Isolated from Compost in Ireland
por: Ryan, Adam, et al.
Publicado: (2021)

Draft Genome Assembly of Rhodobacter sphaeroides 2.4.1 Substrain H2 from Nanopore Data
por: Leidenfrost, Robert Maximilian, et al.
Publicado: (2020)

Complete Genome Sequence of Neisseria musculi Using Illumina and PacBio Sequencing
por: Thapa, Eliza, et al.
Publicado: (2021)

Illumina Sequencing Reveals the First Near-Complete Genome Sequence of Ugandan Passiflora Virus
por: Mbeyagala, E. K., et al.
Publicado: (2019)

Complete Genome Sequence of Lactobacillus johnsonii MR1, Isolated from a BALB/c Mouse Cecum
por: Ravi, Keerthikka, et al.
Publicado: (2022)

Complete Genome Sequence of Pantoea agglomerans ASB05 Using Illumina and PacBio Sequencing
por: Lee, Sang In, et al.
Publicado: (2021)

Utilization of Hybrid Assembly Approach to Determine the Genome of an Opportunistic Pathogenic Fungus, Candida albicans TIMM 1768
por: Panthee, Suresh, et al.
Publicado: (2018)

Complete Genome Sequence of Nocardia farcinica W6977(T) Obtained by Combining Illumina and PacBio Reads
por: Gulvik, Christopher A., et al.
Publicado: (2019)

Complete Genome Sequence of Enterobacter asburiae Strain AEB30, Determined Using Illumina and PacBio Sequencing
por: Tran, Thao D., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_co4anqji01bf9oq109hu404kq5