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Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance

PURPOSE: The current study aimed to propose a Deep Learning (DL) and Augmented Reality (AR) based solution for a in-vivo robot-assisted radical prostatectomy (RARP), to improve the precision of a published work from our group. We implemented a two-steps automatic system to align a 3D virtual ad-hoc...

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Autores principales: Tanzi, Leonardo, Piazzolla, Pietro, Porpiglia, Francesco, Vezzetti, Enrico
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8354939/
https://www.ncbi.nlm.nih.gov/pubmed/34165672
http://dx.doi.org/10.1007/s11548-021-02432-y
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author Tanzi, Leonardo
Piazzolla, Pietro
Porpiglia, Francesco
Vezzetti, Enrico
author_facet Tanzi, Leonardo
Piazzolla, Pietro
Porpiglia, Francesco
Vezzetti, Enrico
author_sort Tanzi, Leonardo
collection PubMed
description PURPOSE: The current study aimed to propose a Deep Learning (DL) and Augmented Reality (AR) based solution for a in-vivo robot-assisted radical prostatectomy (RARP), to improve the precision of a published work from our group. We implemented a two-steps automatic system to align a 3D virtual ad-hoc model of a patient’s organ with its 2D endoscopic image, to assist surgeons during the procedure. METHODS: This approach was carried out using a Convolutional Neural Network (CNN) based structure for semantic segmentation and a subsequent elaboration of the obtained output, which produced the needed parameters for attaching the 3D model. We used a dataset obtained from 5 endoscopic videos (A, B, C, D, E), selected and tagged by our team’s specialists. We then evaluated the most performing couple of segmentation architecture and neural network and tested the overlay performances. RESULTS: U-Net stood out as the most effecting architectures for segmentation. ResNet and MobileNet obtained similar Intersection over Unit (IoU) results but MobileNet was able to elaborate almost twice operations per seconds. This segmentation technique outperformed the results from the former work, obtaining an average IoU for the catheter of 0.894 (σ = 0.076) compared to 0.339 (σ = 0.195). This modifications lead to an improvement also in the 3D overlay performances, in particular in the Euclidean Distance between the predicted and actual model’s anchor point, from 12.569 (σ= 4.456) to 4.160 (σ = 1.448) and in the Geodesic Distance between the predicted and actual model’s rotations, from 0.266 (σ = 0.131) to 0.169 (σ = 0.073). CONCLUSION: This work is a further step through the adoption of DL and AR in the surgery domain. In future works, we will overcome the limits of this approach and finally improve every step of the surgical procedure.
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spelling pubmed-83549392021-08-25 Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance Tanzi, Leonardo Piazzolla, Pietro Porpiglia, Francesco Vezzetti, Enrico Int J Comput Assist Radiol Surg Original Article PURPOSE: The current study aimed to propose a Deep Learning (DL) and Augmented Reality (AR) based solution for a in-vivo robot-assisted radical prostatectomy (RARP), to improve the precision of a published work from our group. We implemented a two-steps automatic system to align a 3D virtual ad-hoc model of a patient’s organ with its 2D endoscopic image, to assist surgeons during the procedure. METHODS: This approach was carried out using a Convolutional Neural Network (CNN) based structure for semantic segmentation and a subsequent elaboration of the obtained output, which produced the needed parameters for attaching the 3D model. We used a dataset obtained from 5 endoscopic videos (A, B, C, D, E), selected and tagged by our team’s specialists. We then evaluated the most performing couple of segmentation architecture and neural network and tested the overlay performances. RESULTS: U-Net stood out as the most effecting architectures for segmentation. ResNet and MobileNet obtained similar Intersection over Unit (IoU) results but MobileNet was able to elaborate almost twice operations per seconds. This segmentation technique outperformed the results from the former work, obtaining an average IoU for the catheter of 0.894 (σ = 0.076) compared to 0.339 (σ = 0.195). This modifications lead to an improvement also in the 3D overlay performances, in particular in the Euclidean Distance between the predicted and actual model’s anchor point, from 12.569 (σ= 4.456) to 4.160 (σ = 1.448) and in the Geodesic Distance between the predicted and actual model’s rotations, from 0.266 (σ = 0.131) to 0.169 (σ = 0.073). CONCLUSION: This work is a further step through the adoption of DL and AR in the surgery domain. In future works, we will overcome the limits of this approach and finally improve every step of the surgical procedure. Springer International Publishing 2021-06-24 2021 /pmc/articles/PMC8354939/ /pubmed/34165672 http://dx.doi.org/10.1007/s11548-021-02432-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Tanzi, Leonardo
Piazzolla, Pietro
Porpiglia, Francesco
Vezzetti, Enrico
Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title_full Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title_fullStr Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title_full_unstemmed Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title_short Real-time deep learning semantic segmentation during intra-operative surgery for 3D augmented reality assistance
title_sort real-time deep learning semantic segmentation during intra-operative surgery for 3d augmented reality assistance
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8354939/
https://www.ncbi.nlm.nih.gov/pubmed/34165672
http://dx.doi.org/10.1007/s11548-021-02432-y
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