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Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue

N6-methyladenosine (m(6)A) modification plays important roles in the pathology of a variety of diseases. However, the roles of m(6)A modification in sepsis-induced myocardial dysfunction are not well defined. Rats were divided into control and lipopolysaccharide (LPS)-induced sepsis group. Global m(...

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Autores principales: Han, Ye-Chen, Xie, Hong-Zhi, Lu, Bo, Xiang, Ruo-Lan, Zhang, Hai-Peng, Li, Jing-Yi, Zhang, Shu-Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8355517/
https://www.ncbi.nlm.nih.gov/pubmed/34395520
http://dx.doi.org/10.3389/fmolb.2021.670160
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author Han, Ye-Chen
Xie, Hong-Zhi
Lu, Bo
Xiang, Ruo-Lan
Zhang, Hai-Peng
Li, Jing-Yi
Zhang, Shu-Yang
author_facet Han, Ye-Chen
Xie, Hong-Zhi
Lu, Bo
Xiang, Ruo-Lan
Zhang, Hai-Peng
Li, Jing-Yi
Zhang, Shu-Yang
author_sort Han, Ye-Chen
collection PubMed
description N6-methyladenosine (m(6)A) modification plays important roles in the pathology of a variety of diseases. However, the roles of m(6)A modification in sepsis-induced myocardial dysfunction are not well defined. Rats were divided into control and lipopolysaccharide (LPS)-induced sepsis group. Global m(6)A levels of left ventricle tissue were measured by LC-MS/MS, and transcriptome-wide m(6)A modifications were profiled using epitranscriptomic microarrays (mRNAs and lncRNAs). Bioinformatics analysis was conducted to understand the functional implications of m(6)A modifications during sepsis. Methylated lncRNAs and mRNAs were measured by m(6)A single-base site qPCR. The global m(6)A levels in left ventricle tissue were significantly decreased in the LPS group. While 27 transcripts (23 mRNAs and four lncRNAs) were hypermethylated, 46 transcripts (39 mRNAs and 7 lncRNAs) were hypomethylated in the LPS group. The mRNA expression of writers and readers was significantly decreased in the LPS group. The m(6)A modification of Clec1b, Stk38l and Tnfrsf26 was associated with platelet activation and apoptotic pathways. Moreover, the decrease in m(6)A modification of lncRNA XR_346,771 may be related to cation import in cardiac tissue. Our data provide novel information regarding changes to m(6)A modifications in cardiac tissue during sepsis, and m(6)A modifications might be promising therapeutic targets.
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spelling pubmed-83555172021-08-12 Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue Han, Ye-Chen Xie, Hong-Zhi Lu, Bo Xiang, Ruo-Lan Zhang, Hai-Peng Li, Jing-Yi Zhang, Shu-Yang Front Mol Biosci Molecular Biosciences N6-methyladenosine (m(6)A) modification plays important roles in the pathology of a variety of diseases. However, the roles of m(6)A modification in sepsis-induced myocardial dysfunction are not well defined. Rats were divided into control and lipopolysaccharide (LPS)-induced sepsis group. Global m(6)A levels of left ventricle tissue were measured by LC-MS/MS, and transcriptome-wide m(6)A modifications were profiled using epitranscriptomic microarrays (mRNAs and lncRNAs). Bioinformatics analysis was conducted to understand the functional implications of m(6)A modifications during sepsis. Methylated lncRNAs and mRNAs were measured by m(6)A single-base site qPCR. The global m(6)A levels in left ventricle tissue were significantly decreased in the LPS group. While 27 transcripts (23 mRNAs and four lncRNAs) were hypermethylated, 46 transcripts (39 mRNAs and 7 lncRNAs) were hypomethylated in the LPS group. The mRNA expression of writers and readers was significantly decreased in the LPS group. The m(6)A modification of Clec1b, Stk38l and Tnfrsf26 was associated with platelet activation and apoptotic pathways. Moreover, the decrease in m(6)A modification of lncRNA XR_346,771 may be related to cation import in cardiac tissue. Our data provide novel information regarding changes to m(6)A modifications in cardiac tissue during sepsis, and m(6)A modifications might be promising therapeutic targets. Frontiers Media S.A. 2021-07-28 /pmc/articles/PMC8355517/ /pubmed/34395520 http://dx.doi.org/10.3389/fmolb.2021.670160 Text en Copyright © 2021 Han, Xie, Lu, Xiang, Zhang, Li and Zhang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Han, Ye-Chen
Xie, Hong-Zhi
Lu, Bo
Xiang, Ruo-Lan
Zhang, Hai-Peng
Li, Jing-Yi
Zhang, Shu-Yang
Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title_full Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title_fullStr Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title_full_unstemmed Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title_short Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue
title_sort lipopolysaccharide alters the m6a epitranscriptomic tagging of rnas in cardiac tissue
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8355517/
https://www.ncbi.nlm.nih.gov/pubmed/34395520
http://dx.doi.org/10.3389/fmolb.2021.670160
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